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scnpilot_solids2_trim150_scaffold_116_curated_46

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(49163..51784)

Top 3 Functional Annotations

Value Algorithm Source
Surface antigen variable number repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMK6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 882.0
  • Bit_score: 790
  • Evalue 1.70e-225
Uncharacterized protein {ECO:0000313|EMBL:GAO42847.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 888.0
  • Bit_score: 808
  • Evalue 8.20e-231
surface antigen variable number repeat-containing protein; K07277 outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 882.0
  • Bit_score: 790
  • Evalue 5.20e-226

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2622
TTGGGTTATACCTTTTTTGCAATACTTTTTATGCTTTCGCAGAATGCGGTTGCACAATCGCAAATGGTAGATTTTGCCAAAAGCGAAGAAGTAGAAATTGAAGAAATAAAAGTTGAAGGCACTAAGTTTTTAGATGAAAGAATTTTAGTTACACTTTCGGCTTTGCGCGTTGGCGATAAAATAAAAGTGCCGGGCGAAGGCATTTCTAAAGCCATAAAAAACCTTTGGAAACAACGACTGTTTACATTTGTAGCAGTTTACATCACAAAACAAGAAAAAGGGAAAGTTTGGCTTTTAATTAAAGTAGAAGAACGCCCCCGAATTTCGCGCTACACCATTAAAGGCGTAAAATCTGGCGATTTAGAAGAGTTGAGAAAGAAAATTGACCTAAGAGCCGGAAGTATTTTAACCGAAAGTGTAAAAGCACAAGCTGCCAATGCGCTAAAAATGTATTATGTTGATAAAGGCTACTTAAATACAAGTGTTAGTGTAAATGAAAAGAAAGATTCGCTTATTCCCAATAGTGTAAAAGTAGAATTGCGTGTAGATAAAGGAGAGAGAGTAAAAATAAACTACATTACATTTGATGGAGTACAAAAAGTGAATGCAAACCGCTTGCGCAGAGCTATGAAAGAAACCAAAGAGAAAGTAAAATTCGATTTGGACGAAATTCTAAACTTCAAGAAAAACATTAAAGACAGTATTTGGAGAAAACACCCGTACAAATTACTTGAAATTTCACCAATGCGTATTTATGAGTACGTAGATAGATTTGCAAACCTTAACTTTTTTAAAAGCTCAAAATTTAAGCGTAAGGAATATGAAGACGATAAACGCAAAATAATTGAGTACTATAACTCACAAGGGTTTCGCGATGCTGCTATTGTACACGATTCTGTTTACCAAACCGATTTGCGCAATTTGAATATTGATATTTCGGTTGATGAAGGCAGAAGATATTATTTCAGAAATATTTTCTTAAGTGGCAACACAAAATATTCCGACTCGCTAATTTATCGTATTGTAAACATTAGCAAAGGTGAAATTTACAACCAAAAGCTATTAGATGAAAAACTCTTTATGAGCCAAAACGGTGGCGATTTAAGTTCACTTTATATGGACGATGGCTATTTGTTTTTCAGCGTTACACCAATGGAAGTAAAAATTGAAGGCGATTCAATTGATGTGGAATTACGAATAAACGAAGGTCCGCAAGCTACCATTAAAGATGTACGAATTTTAGGAAACACTAAAACAAACGAAAGAGTTATTAGACGTGAGCTTTACACTTTGCCGGGCAACAAATTCAGCCGTAGCGACATGTTGCGCTCACAAAGACAAATCGTAAACTTAGGTTATTTTGACCCGCAGCAATTAGACATGGTTCCAATTCCAAACCCTGAAAAAGGAACTGTAGATATTGAATATCGCGTTACCGAAAAACCTTCAGACCAATTAGAACTTTCTGCCGGTTGGGGCGGTAGCAGAAGCCAAGGCGGTGGTGGTTTAGTTGGAACTCTCGGCTTAACTTTCACCAACTTTTCACTTAGAAATATCATTAACAAAAAAGCTTGGAATCCTTTGCCATCGGGCGATGGACAGCGCCTGAGTTTGCGTTTCCAAAGTACCGGAGCACAAGCTCAATTCTATACAGTTTCGTTTACAGAACCTTGGCTTGGCGGAAAAAAACCACAATCGCTTACGCTTAGTTTCAACAGAACGCGCCTAAACAATTTAGATGCGAACTACAAAATTGCAGGAAAATATATTGCTACTGCTGCTACCGTAGCTTTTGGTACACGATTAAAAAAGCCGGATGACTTTTTTACTGCTGAGTTTGCAGTTTCCTTCCAGCGCTACGAACTTTCTAATTATCCAAACTCTTTCTTTATTTTCCAAGAAGGAAAAGCGAACAACTTAAACTTCTCCTTTAACCTTTCAAGAAACTCTATTGACGCTCCACTTTACCCAACACGAGGTGTGTTATTCGACTTTACAGTAAGTGCAACTTTGCCATACTCACTCATGTTTGCCGGCAGAAAAAATCTTGACTATACCGATCCGGAACTTTCAAATTCAAAAAGATACAACTGGATTGAATACCACAAATGGAAATTTAAAGTTGATTGGTATGTGCCAATTTGGAAAAACTTGGTGCTGAAAACAAGTGCTAAGTTCGGTTTCTTAGGTTTGTACAATAGCAATATTGGCTACTCTCCTTTTGAAAGATTTGAGTTGGGCGGTGATGGAATTTCTAATGCTCAAATTCTTGGTAGAGACATTGTGAGTTTGCGCGGTTATCCGGTACTTTCACCAAGCGGAGGCGCGCCACTTTACAACAAATTCTCTATGGAATTGCGCTATCCGGTATCGCTTAATCCATCTGCAACAATTTACGCCTTAGCATTCTTTGATGGAGGTAATTATTGGATGAATTTTAAAGATTATCGTCCTTACGATTTGAAAAAGAGTGCCGGCTTAGGTGTGCGCGTATTCTTGCCAATGTTTGGTTTGCTTGGTTTCGACTACGGTATTGGTTGGGATAGAGCGCCAAAAGGCGGAAACAATATTTTTAGCAAATACGGTGAGTTTAGAATTGTACTTGGCTTTGAACCAGAATAG
PROTEIN sequence
Length: 874
LGYTFFAILFMLSQNAVAQSQMVDFAKSEEVEIEEIKVEGTKFLDERILVTLSALRVGDKIKVPGEGISKAIKNLWKQRLFTFVAVYITKQEKGKVWLLIKVEERPRISRYTIKGVKSGDLEELRKKIDLRAGSILTESVKAQAANALKMYYVDKGYLNTSVSVNEKKDSLIPNSVKVELRVDKGERVKINYITFDGVQKVNANRLRRAMKETKEKVKFDLDEILNFKKNIKDSIWRKHPYKLLEISPMRIYEYVDRFANLNFFKSSKFKRKEYEDDKRKIIEYYNSQGFRDAAIVHDSVYQTDLRNLNIDISVDEGRRYYFRNIFLSGNTKYSDSLIYRIVNISKGEIYNQKLLDEKLFMSQNGGDLSSLYMDDGYLFFSVTPMEVKIEGDSIDVELRINEGPQATIKDVRILGNTKTNERVIRRELYTLPGNKFSRSDMLRSQRQIVNLGYFDPQQLDMVPIPNPEKGTVDIEYRVTEKPSDQLELSAGWGGSRSQGGGGLVGTLGLTFTNFSLRNIINKKAWNPLPSGDGQRLSLRFQSTGAQAQFYTVSFTEPWLGGKKPQSLTLSFNRTRLNNLDANYKIAGKYIATAATVAFGTRLKKPDDFFTAEFAVSFQRYELSNYPNSFFIFQEGKANNLNFSFNLSRNSIDAPLYPTRGVLFDFTVSATLPYSLMFAGRKNLDYTDPELSNSKRYNWIEYHKWKFKVDWYVPIWKNLVLKTSAKFGFLGLYNSNIGYSPFERFELGGDGISNAQILGRDIVSLRGYPVLSPSGGAPLYNKFSMELRYPVSLNPSATIYALAFFDGGNYWMNFKDYRPYDLKKSAGLGVRVFLPMFGLLGFDYGIGWDRAPKGGNNIFSKYGEFRIVLGFEPE*