ggKbase home page

scnpilot_solids2_trim150_scaffold_57_curated_21

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 19438..20145

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHR6_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 234.0
  • Bit_score: 260
  • Evalue 2.10e-66
Thioredoxin {ECO:0000313|EMBL:KFF27056.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 235.0
  • Bit_score: 309
  • Evalue 4.20e-81
Thioredoxin domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 234.0
  • Bit_score: 260
  • Evalue 6.60e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium vrystaatense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGTACAAAACCATCATCATCGCTCTTTTCGCTCTGGTCATGATCAGCTGCAGCAAAGCCCAGAACACCGCAAGCACAACATCACTTTCTGCCACCGAGTTTTCAGAAAAACTGAAAAAAACTCCTAATGCCCAAGTGGTGGATGTAAGAACCCTTAACGAATATAAAAAAGGGCATATTCAGAATGCGGTAAACATCGACTGGAATGCTGATGATTTCGCAGAAAAAGCAGCCACTCTGGATCCGGCAAAACCTGTCTTTTTGTACTGCCTCAGTGGGCCCCGAAGTGAAGCCGCAGCAGAAAAGCTGAAGGAAATGGGCTACAGTGAAATCTATGAGATGAAAAGAGGTATGATGGAATGGCGCAGCAAAAACCTGCCCGAGTTAAAATCCGCAGCAGCTACGCAAGGCATGAGTTTACAGCAATACAACGAGGAGCTGAAAAGCGACCGTTTGGTGCTTGTCGATTTTTATGCTGACTGGTGTGCGCCTTGTAAAAAAATGGAACCTTACCTGAGCAAAATAGCCGCAGAAATGCCTGAGAAAGTTAAAATTGTAAGGGTAAATGCCGATGACAATACAGAACTGTGCAAAGCGATGAATGTTTCTGCCCTGCCGGTTCTTAAATTATACAGAAACAACGAAATCATTTGGGAGAGCCTTGGCTTTGTAGAAGAAGCCGAAGTGCGGAAACAGCTCCTGAAATAA
PROTEIN sequence
Length: 236
MYKTIIIALFALVMISCSKAQNTASTTSLSATEFSEKLKKTPNAQVVDVRTLNEYKKGHIQNAVNIDWNADDFAEKAATLDPAKPVFLYCLSGPRSEAAAEKLKEMGYSEIYEMKRGMMEWRSKNLPELKSAAATQGMSLQQYNEELKSDRLVLVDFYADWCAPCKKMEPYLSKIAAEMPEKVKIVRVNADDNTELCKAMNVSALPVLKLYRNNEIIWESLGFVEEAEVRKQLLK*