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scnpilot_solids2_trim150_scaffold_34_curated_128

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 161708..162388

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 221.0
  • Bit_score: 299
  • Evalue 1.20e-78
ribosomal large subunit pseudouridine synthase D n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D58C8 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 224.0
  • Bit_score: 315
  • Evalue 4.00e-83
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 221.0
  • Bit_score: 311
  • Evalue 1.40e-81

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Taxonomy

R_Bacteroidetes_44_7 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGAAAGATATATCGGTGATTTATGAGGACAATCATTTAATTGTTATCAATAAGAAACCATCTCAGATTGTTCAGGGAGATAAAACAGGCGACGAAACATTGCCTGATATGATTAAATCCTACTTGAAAGAAAAATATAATAAGCCCGGAAATGTATTTTGCGGCGTTGTTCATCGTCTGGACAGGCCAACCAGCGGGATAGTTGTTTTCGCTAAAACTTCAAAAGCCCTTTCCAGGCTTAGTGAGCAGTTCAAATCCCGTGAAACAGAAAAGACCTACTGGGCTGTTGTAGAAGATGCTCCGCCAAAGGATGAAGAAAAGTTAGAACATTATCTGCTGAAAAATGAAAAGCAGAACAAATCCTATATTGTAGCGGTGGATAAGCCGGGAGCCAAAAAAGCTTCTTTACATTATAAGATGATCAAATCTTCTACCCGTTATCATTTGTTAGAAGTACAGCTATTTACCGGAAGACATCATCAGATCCGTTGTCAGCTGGCGGGTATTGGTTGTGCTGTTAAAGGAGATTTAAAATACGGTGCGAAAAGATCAAATAAAGATGGTTCGATTCATCTGCATGCGCGAAAATTAGTATTAACTCATCCGACCACTAAAGAAAGATTGCTGTTTGTTGCCCCGGTTCCTGATGATAATCTGTGGAAATTTTTCGAAGATTTATAA
PROTEIN sequence
Length: 227
MKDISVIYEDNHLIVINKKPSQIVQGDKTGDETLPDMIKSYLKEKYNKPGNVFCGVVHRLDRPTSGIVVFAKTSKALSRLSEQFKSRETEKTYWAVVEDAPPKDEEKLEHYLLKNEKQNKSYIVAVDKPGAKKASLHYKMIKSSTRYHLLEVQLFTGRHHQIRCQLAGIGCAVKGDLKYGAKRSNKDGSIHLHARKLVLTHPTTKERLLFVAPVPDDNLWKFFEDL*