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scnpilot_solids2_trim150_scaffold_160_curated_120

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 121167..121418

Top 3 Functional Annotations

Value Algorithm Source
Holliday junction resolvase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D144_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 83.0
  • Bit_score: 108
  • Evalue 3.60e-21
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:EDQ34379.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 83.0
  • Bit_score: 108
  • Evalue 5.10e-21
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 83.0
  • Bit_score: 89
  • Evalue 7.20e-16

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Taxonomy

Hoeflea phototrophica → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCGTGTTTCCGAAAAAGGGCAGATCACCATCCCAAAGAATCTGCGGGAGCTTGCCGGCATCAAGCCGAATGGCAACGTGTCTATCCATCTTGAGGGAGGGCGACTCGTGATCGAAACCGCGGACCGTTCCGTCACCGAAGCCAACAAGGCACGCCTGGAGCGATTTATGGAAGCGCTCAGGAAGCTGGAAGGAACGGGCGATCCTTCGATAAGCGCCGATGACGTGATGCGTGCGACCCGGGATCGCTGA
PROTEIN sequence
Length: 84
MRVSEKGQITIPKNLRELAGIKPNGNVSIHLEGGRLVIETADRSVTEANKARLERFMEALRKLEGTGDPSISADDVMRATRDR*