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scnpilot_solids2_trim150_scaffold_5_curated_173

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(177876..178697)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031FF6D9 similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 270.0
  • Bit_score: 366
  • Evalue 1.80e-98
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAK72979.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 276.0
  • Bit_score: 297
  • Evalue 1.90e-77
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 232.0
  • Bit_score: 239
  • Evalue 1.10e-60

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
GTGCCAAAGGCCCGAGCACGAAGTGGCCCTCTGTATCTTCAGATCGCAGACGGCCTGAAAGAGCAGATCGACGAACTGCGGCCGGGCGCGCGCATTCCAAGCGAGCCGCAGATCGCCAGGGATTGGGGTGTCAGCCGGTTTACGGTAGCCAAGGCTGTCGAGCAACTCGTCGACGAGGGCCTCGTCACGCGCCGGCAGGGAAGCGGGTCGTTCGTCGCGGAAGCGCCGCTGCGCCGTTCGCCAGGCTATTTGCTTAGTTTTACGGAGGCGGTCGAGGCGGCCGGGCATGTCGCCTCGCACCGCCTCCTCGCATTCGAGCCGACCCCCTGGATCGAAGGGCTGCCTTACGCACCCGATACCGAACTGATGCTGATGGACAGGCTGAGGCTCATGGACGGGAAGGCCGTTGCGAGACACCGCTCCGTTCTTTCGGCGGAACTGCTCGGAGCAATCGGTCTTGACCGGGCCGCCGCCGAACATCCGAATTTTTCGCTTTACCGCCATTTCGAGAGACATGGTCTTTCCGTCGCAAGCGCGACCGAAAAGCTGGTCGCCTGCCGTGCCGGGAAAGAGGACAGAAAGCTGCTCGCATTGGATGGAGATGCGGTCGTCGTTGCCGTCACCCGCCATTCCTTCACCACGGAGGGCACGCCGATCGACGCTGTCGATGCGATCTATGACGCGCGACGATACACCTACGAAGCAAGGCTCGTCCGTCAGCGTCGACAGGGGAACAACCTAAACAGGGAGAACCACGATGAAGAAATCTTTGGCAATCGGCGTAGCCACCTTGGCCCTCGCCTCGGCCTTTGGAACAATTAG
PROTEIN sequence
Length: 274
VPKARARSGPLYLQIADGLKEQIDELRPGARIPSEPQIARDWGVSRFTVAKAVEQLVDEGLVTRRQGSGSFVAEAPLRRSPGYLLSFTEAVEAAGHVASHRLLAFEPTPWIEGLPYAPDTELMLMDRLRLMDGKAVARHRSVLSAELLGAIGLDRAAAEHPNFSLYRHFERHGLSVASATEKLVACRAGKEDRKLLALDGDAVVVAVTRHSFTTEGTPIDAVDAIYDARRYTYEARLVRQRRQGNNLNRENHDEEIFGNRRSHLGPRLGLWNN*