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scnpilot_solids2_trim150_scaffold_112_curated_242

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(263341..264156)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE5E36 related cluster n=1 Tax=unknown RepID=UPI0003CE5E36 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 277.0
  • Bit_score: 331
  • Evalue 1.10e-87
Anti-sigma factor {ECO:0000313|EMBL:ESW81033.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 277.0
  • Bit_score: 331
  • Evalue 1.60e-87
putative transmembrane transcriptional regulator (anti-sigma factor) similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 303.0
  • Bit_score: 275
  • Evalue 1.70e-71

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGAAACACGACGATAAATCGACGGCGAACCCCGAGGACCTGCGGCTGTTGCTCCAGGCACTGGTCGACGGCGAGCTCGATGCGGCGACCGCGCTCGAAATCGAGCGGCGCATAGCCGGCGATCCGGCACTTGCCGCCGAGCATGCAAGCATCGCCGCGGTGAGCGGAGCGGTGCGCCGCCAGCCCCGGCCCGAGATACGCGAAGCCTTCCAGGCGCGCATCGCCGCCATCGGAGAGGACGGGACAGCCGCCCCACGGCCCGCGGCCCGCCACGTCACAGCTCACCGGACCTCTTCTTTCGACTGGCGTGCCATGGCGGCCTCCATCATGGTCACCGCGGTGCTGGCCAGTGGCGGAACCTGGTGGGCGATGCGGCCCGCTCCTGCGAGTTTCGCCGACGCCGTCGCCGACGCGCACCGACGCGGCCTGCTGGCGGCGAGCCCCGTCGATGTCGCCTCTTCCGACCGGCACACGGTAAAACCCTGGCTGGACGGCCGCATTGGCCTGTCTCCGCCGGCGGCCGATCTTTCGGCGGAGGGGTTCAAGCTCCTCGGCGGGCGCGTCGAAGTGGTGGACAACGTCCCGCTGCCCGCCCTGGTCTACCGCTACAACGAGCACCTGATCACGCTGGTCGCCGCGCCACGCGGCCCCGGGCGCGGGATCGCAACGCCTGCTCCCGCCGATCTGTCGGCCGGCGGCTTCTCTGTCGTCCACTGGACCGACGACGCCTTTTCCTACTGGGCGGTTTCGGATGCCGAACGCCATGTCCTCGACGATTTCAGCAGTCGCTTCCGGAAGGCGGTCGCGAAAGGGTAA
PROTEIN sequence
Length: 272
MKHDDKSTANPEDLRLLLQALVDGELDAATALEIERRIAGDPALAAEHASIAAVSGAVRRQPRPEIREAFQARIAAIGEDGTAAPRPAARHVTAHRTSSFDWRAMAASIMVTAVLASGGTWWAMRPAPASFADAVADAHRRGLLAASPVDVASSDRHTVKPWLDGRIGLSPPAADLSAEGFKLLGGRVEVVDNVPLPALVYRYNEHLITLVAAPRGPGRGIATPAPADLSAGGFSVVHWTDDAFSYWAVSDAERHVLDDFSSRFRKAVAKG*