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scnpilot_solids2_trim150_scaffold_73_curated_18

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(16731..17639)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J3BKM9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 272.0
  • Bit_score: 314
  • Evalue 1.20e-82
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EUB99910.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 272.0
  • Bit_score: 314
  • Evalue 1.70e-82
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 263.0
  • Bit_score: 128
  • Evalue 5.00e-27

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCCTATCAACATCGGTTTCCGCTCATCAACCAATAAGGTCGCGCCGATCGCCTATTTGGGCAGCGTCGAACTTGTGACCCTGTCTCAGCAGAAGGCACATACGATCGAACAACTCGCCGATCTAGCCTACACCAGAGCGGACAAGTACATTCTCGTCATCGTCGAAAACGGAATGATCTCGGTTAACCAGCGCGACCGGCAGTACAGGCTCGAAGAGGCCCACTACGCCTTGTTCGACTGTGGCAGCAAAGTCCAGTTTTCCGGGGCGGGGGACTACTCGGTGGTCGCGGTCTTCATACCACGGTTCCTGCTTCAGGCACGGCTTCGCAATACCCAGACGATCATGGCCCGACCCCTGTCGTGCGTTGGATCGCCCTGGCGCATCGTGTCGAACCTGCTGCGGATCCTTGCCAGTGAAATCAGGAACATTCCAGCGCCGATGGCCTATGGCTATGCAAGCCAGGTGGTCGAACTGGTAAGCATTGCCGTGGAAGCCGACACACAGGTCTCGGGGGATTATTCGGGGCGCCAGGCCATCTTCCGGCGCTGCACGGCCTACATCAAAAGCAATTTGGCCGACGAGGAGATCACGCCCAACAAAATCGCCCATGCCATGGGTATCTCGGTGCGCTATCTCCATAAGGTCTTCCAGGAATCGGGAGATTCCGTATGTGAGTACCTGCGCGCCTCGCGCCTGGAGACCGCGCGAATGGAGCTTGCGGATCCAAGGAAGTCATCCGTGCAGATACGCGAGATCGCGCACAGGGCAGGGTTCCGCAGCCAGGCGCATTTCGCTGCCGCTTTCAGGCAACGCTACGGCGTCTCGGCAACCGAGTGGCGACGAAGCGCGCTTAGGCAGATAGGAGCCGAGGCGATGACACGAGAGATGACTGCCGGAGCCGCCTGA
PROTEIN sequence
Length: 303
MPINIGFRSSTNKVAPIAYLGSVELVTLSQQKAHTIEQLADLAYTRADKYILVIVENGMISVNQRDRQYRLEEAHYALFDCGSKVQFSGAGDYSVVAVFIPRFLLQARLRNTQTIMARPLSCVGSPWRIVSNLLRILASEIRNIPAPMAYGYASQVVELVSIAVEADTQVSGDYSGRQAIFRRCTAYIKSNLADEEITPNKIAHAMGISVRYLHKVFQESGDSVCEYLRASRLETARMELADPRKSSVQIREIAHRAGFRSQAHFAAAFRQRYGVSATEWRRSALRQIGAEAMTREMTAGAA*