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scnpilot_solids2_trim150_scaffold_48_curated_23

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 20028..20525

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 166.0
  • Bit_score: 241
  • Evalue 2.20e-61
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 166.0
  • Bit_score: 241
  • Evalue 9.90e-61
3-isopropylmalate dehydratase small subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K0_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 166.0
  • Bit_score: 241
  • Evalue 7.10e-61

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGCGGACGCATCTTCCTTTTCGGCGACGATATCGACACCGACCAGCTCGCGCCGGGCCAGTATATGAAGGGCGGGCTTGCCGAACTTGCCGCCCATTGCCTGGAGGCTCTGCGGCCGGATTTTCCGGCGTCGGTCAGGCAGGGCGACATCGTGGTCGCCGGACGCAATTTCGGCATGGGCTCCTCGCGCGAGCAGGCGGCCGAGGCGCTGAAATTCCTTGGTGTCGCCGGCGTCGTGGCGCGCTCGTTTGCCGGCATCTTCTACCGCAACGCCATCAATCTCGGCCTTCCGGTCATCGTGGCGGAGGGTGACCTCGGCTCCGTTCGGGACGGGATGGAAGCCGTGCTCGATCTGGACGCAGGAGAATTGCGGCCGGCCGGCGCCGCGCCGGTCGCGCTGGAGCCGCTGCCCGACAATCTGAAAACGCTGCTCGCCGATGGCGGGCTGGTACCGCATCTGAAAAAGCGCTTCGCGGCGGGGCGCAACCGGGACTGA
PROTEIN sequence
Length: 166
MSGRIFLFGDDIDTDQLAPGQYMKGGLAELAAHCLEALRPDFPASVRQGDIVVAGRNFGMGSSREQAAEALKFLGVAGVVARSFAGIFYRNAINLGLPVIVAEGDLGSVRDGMEAVLDLDAGELRPAGAAPVALEPLPDNLKTLLADGGLVPHLKKRFAAGRNRD*