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scnpilot_solids2_trim150_scaffold_14_curated_91

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(97686..98573)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Rhizobium gallicum RepID=UPI00035CDA66 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 294.0
  • Bit_score: 334
  • Evalue 1.40e-88
putative alternative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 293.0
  • Bit_score: 330
  • Evalue 6.50e-88
Putative alternative RNA polymerase sigma factor {ECO:0000313|EMBL:CAK03371.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 293.0
  • Bit_score: 330
  • Evalue 2.90e-87

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
GTGATCGCGAAAAATCTTCTGATGGATGAATTCGAGGCCAATCGCGCTCGCCTCGAATCGGTTGCCTACCGCATGCTCGGATCGCGCAGCGAGGCCGAGGATGCGGTGCAGGAGGTATGGCTGAGGCTCGATCGCACCGACGCCCAATCCATCGGCAATATCGGCGGCTGGCTGACCACCGTGGTTGCCCGACTCTGCCTCGACATGTTGCGCGCTCGCAAGTCGCGCCGGGAGGATTCGCTCGATCAAATGGCCGGGGAGGAGATTCGGATAGAACCCTCCGTGGCGGCGACCGGCGCTACGCCCGAAGAGCAGATCGCGATGGCGGATTCCGTCGGGCTCGCCATGCTGGCGGTGCTGGAAACGCTCGGCCCCGCGGAGCGCGTCGCTTTTGTGCTCCACGACATGTTCGCCGTGCCGTTCGAGGAGATCGCGCCCGTGATCGGCCGCTCGCATGATGCAACCCGTCAACTCGCCAGCCGTGCCCGCCGGCGCGTGCAGGGCACAAGACCGGATGGTGCGATCGACAATGCGCGTCGCCGCGAAATCGTCGGCGCCTTTATCGCAGCCTCGCGCGGCGGCGATTTCTCGGCGCTACTTTCGCTTCTCGCCCCTGACGTAGTGTTTACCCCGGATGAGACAGCTACGCGGCTTGGCCAGCAAGGGGAGGCCCGGGGCGCCGCGGCAGTCGCGGCGTTGTTCAACGGCCGAGCGCAGGCGGCGCGACCGGCCCTTATCGATGGGACGGTCGATGTTGCTGTCCTTCCTGGCGGACACCTCCTGTTGGTGCTTAGGCTGGATATCACCGACGGACGGATCGCCGGCATCGAAGCCGTAGCCGATACAGGGCGACTGGCGGAACTCGACCTGAGGATACTGGAGGGTTGA
PROTEIN sequence
Length: 296
VIAKNLLMDEFEANRARLESVAYRMLGSRSEAEDAVQEVWLRLDRTDAQSIGNIGGWLTTVVARLCLDMLRARKSRREDSLDQMAGEEIRIEPSVAATGATPEEQIAMADSVGLAMLAVLETLGPAERVAFVLHDMFAVPFEEIAPVIGRSHDATRQLASRARRRVQGTRPDGAIDNARRREIVGAFIAASRGGDFSALLSLLAPDVVFTPDETATRLGQQGEARGAAAVAALFNGRAQAARPALIDGTVDVAVLPGGHLLLVLRLDITDGRIAGIEAVADTGRLAELDLRILEG*