ggKbase home page

scnpilot_solids2_trim150_scaffold_884_curated_23

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(19167..19862)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYC3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 222.0
  • Bit_score: 249
  • Evalue 3.60e-63
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 222.0
  • Bit_score: 249
  • Evalue 5.10e-63
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 218.0
  • Bit_score: 247
  • Evalue 5.70e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCGATACGGCAGCACGGACACAGCGCGGAGGCAAGCGAAGCGGCGTTGATCGCGCGCGCGGTGCAGCGCGACGAAGGCGCGATCCGCGCCCTGATCCAGCAGCATAACCGCCGGCTCTACCGGATCGCGCGCGGCATCGTCGGCAACGAGAGCGAGGCCGAGGACGTGTTGCAGGATGCCTATCTCAAGGCCTTCCGCCATCTCGACACGTTTCGCGGCGATTCGAGCCTGGGCACCTGGCTCGCCCGCATCGTCATCAACGAGGGGCGCGGCCGGCTGCGGCGACGGCGCCCAACCGTCGCGCTGGAGGCGCTCGACATGCAGCATCGTTCGGATGGCACGGTCGTCCCGTTCCCGCTCCTCCAGGCGCAGGACCGCAGCGACCCCGAAGGCGCCGTGGCGCGCTCGCAGATCCAGCGCCTGATGGAAAAGGCCATCGACGACCTGCCGGAAACCTTCCGCACCGTGCTGATCGCGCGCGTGGTGGAGGAAATGAGCACGGAGGAAACCGCGAGCCTGCTCGGCCTCAGGCCCGAGACGGTCAAGACCCGGCTGTTCCGCGCCCGCAAGCTGCTGCGCGAGGATCTCGAGCGCCAGATCGGCCCGATGATTACCGGCACCTTCCCATTCGGCGGCAGCCACTGCGCCCGCCTCGCCGACCGCGTCATCGCGGAACTCGCGAAGCCCGGCTGA
PROTEIN sequence
Length: 232
MAIRQHGHSAEASEAALIARAVQRDEGAIRALIQQHNRRLYRIARGIVGNESEAEDVLQDAYLKAFRHLDTFRGDSSLGTWLARIVINEGRGRLRRRRPTVALEALDMQHRSDGTVVPFPLLQAQDRSDPEGAVARSQIQRLMEKAIDDLPETFRTVLIARVVEEMSTEETASLLGLRPETVKTRLFRARKLLREDLERQIGPMITGTFPFGGSHCARLADRVIAELAKPG*