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scnpilot_solids2_trim150_scaffold_2583_curated_12

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 10636..10920

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCN4_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 94.0
  • Bit_score: 163
  • Evalue 8.20e-38
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 94.0
  • Bit_score: 163
  • Evalue 2.60e-38
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ70050.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 94.0
  • Bit_score: 163
  • Evalue 1.20e-37

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGCTTTTCGGGGAGTTGCAACGACCGGGTGAGACTCTTCCGAAACGCATGGCCCAGACGCTGATCCGCCACTATGGCGAACGGCTGCGTTGCTTGCTCGAAGCGGGAAAGGCACAGGGCGAGTTGCGTGCGGGCCTCGACCTAGATGCCGCAGCCACCCTGTTCATCGGCACGATCCAGGGCCTTGTCATGCAATCCATGCTGGCGGGTGACGTCGCCCGCATTCGTAGCGATGCGCCCGGCGTGTTTGCCATCTATCTGCGCGGTATCGGAACGGTGCAATGA
PROTEIN sequence
Length: 95
MLFGELQRPGETLPKRMAQTLIRHYGERLRCLLEAGKAQGELRAGLDLDAAATLFIGTIQGLVMQSMLAGDVARIRSDAPGVFAIYLRGIGTVQ*