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scnpilot_solids2_trim150_scaffold_454_curated_16

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(16981..20421)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 999.99
  • Bit_score: 1480
  • Evalue 0.0
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 999.99
  • Bit_score: 1477
  • Evalue 0.0
DNA polymerase III, alpha subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PII6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 999.99
  • Bit_score: 1480
  • Evalue 0.0

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3441
ATGATCGAGGATGTCGGCTTCGTGCATCTCCATGTGCATTCCTCGTTCTCGCTGCTCGAAAGCGCGCTGACCGTCGCGACGCTGCTGAAGCTCGCCAAGGCCGATCATATGCCGGCGCTGGCGATGACCGACAGCAACAACCTGTTCGGCGCGTTGGAGTTCTCCGAGAAGGCATCCGGCTACGGCGTGCAGCCGATCATCGGCACGCTGCTCAGCGTCGATTTCGGCGATGCGACCGGCTCGGTCGGGCGCGCGAGCGCCCATAGCGGCGAGCGCGGCAACCTCGTGCTGCTGGCGGCGGACGAGACCGGCTACGAAAACCTGATGCGGCTGTCGAGCAGCGCTTTTCTCGACACGGCATCGCAGGATGCGCCCCATGTCGCGCTGGAGCAGCTTGCCACGTTCGGGCAAGGCATCATCGCGCTGAGCGGTGGGCCGACGGGGCCGCTCGACGCCGCCTTCCGGGCCGGCATGGGCGAGCTTGCGGCCAGCCGATTGCAGAGTCTTCTCAAGATCTTCGGCGATCGTCTTTATATCGAGATTCAACGGCACAAGCTTGCATCCGAGCAGCAGGTCGAGCCGCTGCTGCTCGATCTCGCCTATGGGCAGGGCGTGCCGCTGGTCGCCACCAACCAGGTGAGCTTCGCGGCGCGTGACGATCACGAGGCGCATGATGCGCTGCTATGCATCGCGCAAGGCAACCTGATCTCGGCGAGCGACCGGCACCAGCTCTCGCCGGAACATTGGCTCAAGCCGCGCGCCGCGATGCTGGAACTGTTCAAGGACCTGCCGGAAGCGACGGCGAACACGGTCGAAATCGCCATGCGCTGCAGCTATCGCCCGCGCACGCGAAAACCGATCCTGCCGCATTTCACGGTTGGCGACGGCGAGGGGGCCGAGGATGAGACCGCCGCCCTGACCCGGCAGGCCGAGGAGGGGCTGACGCGGCGGCTGGCCGCGCATGGCACGGCGCCGGGGGTGAGCGAGGAGACCTATCGCGAGCGCCTCGCCTACGAACTCGGCATCATCGTGCGCATGAAATATCCGGGCTACTTCCTGATCGTCTCGGACTTCATCAAATGGGCCAAGTCGCAAGGCATTCCGGTCGGGCCGGGGCGTGGTTCCGGCGCCGGATCGCTGGTCGCCTATGCGCTCACCGTCACCGATCTCGATCCGCTGCGTTTCGGCCTGCTGTTCGAGCGCTTCCTGAACCCCGAGCGCGTGTCGATGCCGGATTTCGACATCGATTTCTGCCAGGACCGGCGCGACGAGGTCATCCGCTACGTGCAGTCACGCTACGGCCATGACCGCGTGGCGCAGATCATCACCTTCGGCACGCTTCTGGCGCGCGGCGTGATGCGCGACGTCGGCCGCGTGCTCGAGATGCCGTATGGCCAGGTCGACCGGCTGACCAAGCTGGTGCCGCAGAACCCGGCCAAGCCCGTGACGCTGGAGGAGGCGATCGCCGAGGAGCCGCGCCTGCGCGCCGAGGCTGAGGCCGAGCCGGTGGTGCAGCGCCTGCTCGCCATTTGCCGCAAGCTCGAGGGGCTGCATCGCCACGCCTCGACCCATGCGGCCGGCATCGTCATTGGCGACCGGCCGCTCGACCGGCTGGTGCCGATGTATCGCGATCCGAAATCCGATATGCCGGTGACGCAGTTCAACATGAAATGGGTCGAGCCGGCCGGGCTGATCAAGTTTGACTTCCTCGGCCTCAAGACGCTCACCGTGCTGAAGCGCGCCGTCGACCTGATCGCGCGGCGCGGCGTGGCGCTCGATCTCGCGGCGCTGCCGCTCGACGACGAAAAAACCTACGCCATGCTGTCGCGGGCCGAGACGGTCGGCATCTTCCAGCTGGAAAGCGCCGGCATGCGCCGGGCGCTGCTCGAGATGAAGCCCGACCGTTTCGAGGACATCATCGCGCTCGTCGCGCTGTACCGGCCGGGGCCGATGGCCAACATCCCGGTCTATTGCGCGCGCAAGCACGGCACCGAGGTGCCGGAATACCCTCATCCGGCGGTCGAGCCGAGCCTGAAGGAGACCTATGGCGTCATCGTCTACCAGGAGCAGGTGATGGAAATCGCCAAGGTCCTGTCGGGCTATTCGCTCGGCGAGGCCGACCTGCTGCGCCGCGCCATGGGCAAGAAGATCAAGGCGGAAATGGATGCGCAGCGCACCCGTTTCGTCGATGGCGCGGTGGCGCGCGAGATTTCCAACGCCAAGGCGAACGAGATTTTCGACCTGCTCGCCAAATTCGCCGATTACGGCTTCAACAAGAGCCACGCGGCCGCCTATGCGCTGGTGTCCTATCAGACGGCCTATCTGAAGGCGCATTACCCGGTCGAGTTCCTGGCCGCCTCGATGACGCTCGACATGTCGAACACCGACAAGCTGGTCGAGTTCCGGCGCGAGGCGCAGCGTCTCGCCATCAAGGTCGAGGCGCCGGCGATCAATCACTCCGTCGATACGTTCGAGGTCGCCGATGGCGCGATCCGCTACGCGCTGTCCGCGCTCAAGGGCGTCGGCACCGAGGCGGTGCGGGCGATCGTCGCGGCGCGCGGCGGGCGGCCTTTTGCCGATATGAGCGATTTCGCGCGCCGGATCAGCGGGCGCCTGGTCAACAAGCGCGTGATCGAGACGCTGGCCTCGGCGGGTGCCTTCGATACGCTCGAGCCGCGCCGCACCGCGCTGGTGATGGGCGCCGACGTGATCGTGGCCACCGCCAATGCCGCGCAGGCGGCGCGCGAAGGCGGCCAGTCGATGCTGTTCGGCGCCAGCGACGAGGCGCCGATCCGGTTGCCGTCCGGGCCGGAATGGTCGCAGAGCGAGCGGCTGCGGCGCGAGTTCGAGGCGATCGGCTTCTTCCTGAGCGGGCATCCGCTCGACGAATATGCCGATGGGCTGGTGAAGCTCCGCATCCAGACCCATGCCGAATTCGGCCGCGCCGTGCGGCAGGGCGCCTCGGCCGGGCGGCTCGCGGCCACCGTGATCGACAAGGTCGAGCGCCGCACCAAGACCGGCAACCGCATGGGCATCGTGCAGTTCTCCGACCAGTCGGGGCAATATGAGGCGATCCTGTTCTCGGAGGGGCTGGCGCAGTTCCGCGACCTGCTGGTGCCGGGCGCGGCGGTGCTGCTCGCGGTCGGGGCGAGTTTCGAGAACGAGGGCCTGCGGCTGCGCGTGCAATCGGTCGAGCCGCTGGAAACCGCATTGGCGCGCGTGCAGCAGGGCGTGCGCATCTTCGTGCGCGACGCGCTGCCGGTCGAGGGCATCGCGCAGCGCCTGACACGGCGCGGCGAGGGCGAAGTCGCGCTGATCGTGATGGCGGACAAGGGCGAAACCGAGGTCGAGATCAGGCTGCCCGGCCGGTTCGAGCTGTCCGGCGTGGTGGTCGGCGCCATCAAGGCGGTGCCGGGCGTGGTCAGCGTGCAGCATGTTTGA
PROTEIN sequence
Length: 1147
MIEDVGFVHLHVHSSFSLLESALTVATLLKLAKADHMPALAMTDSNNLFGALEFSEKASGYGVQPIIGTLLSVDFGDATGSVGRASAHSGERGNLVLLAADETGYENLMRLSSSAFLDTASQDAPHVALEQLATFGQGIIALSGGPTGPLDAAFRAGMGELAASRLQSLLKIFGDRLYIEIQRHKLASEQQVEPLLLDLAYGQGVPLVATNQVSFAARDDHEAHDALLCIAQGNLISASDRHQLSPEHWLKPRAAMLELFKDLPEATANTVEIAMRCSYRPRTRKPILPHFTVGDGEGAEDETAALTRQAEEGLTRRLAAHGTAPGVSEETYRERLAYELGIIVRMKYPGYFLIVSDFIKWAKSQGIPVGPGRGSGAGSLVAYALTVTDLDPLRFGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVQSRYGHDRVAQIITFGTLLARGVMRDVGRVLEMPYGQVDRLTKLVPQNPAKPVTLEEAIAEEPRLRAEAEAEPVVQRLLAICRKLEGLHRHASTHAAGIVIGDRPLDRLVPMYRDPKSDMPVTQFNMKWVEPAGLIKFDFLGLKTLTVLKRAVDLIARRGVALDLAALPLDDEKTYAMLSRAETVGIFQLESAGMRRALLEMKPDRFEDIIALVALYRPGPMANIPVYCARKHGTEVPEYPHPAVEPSLKETYGVIVYQEQVMEIAKVLSGYSLGEADLLRRAMGKKIKAEMDAQRTRFVDGAVAREISNAKANEIFDLLAKFADYGFNKSHAAAYALVSYQTAYLKAHYPVEFLAASMTLDMSNTDKLVEFRREAQRLAIKVEAPAINHSVDTFEVADGAIRYALSALKGVGTEAVRAIVAARGGRPFADMSDFARRISGRLVNKRVIETLASAGAFDTLEPRRTALVMGADVIVATANAAQAAREGGQSMLFGASDEAPIRLPSGPEWSQSERLRREFEAIGFFLSGHPLDEYADGLVKLRIQTHAEFGRAVRQGASAGRLAATVIDKVERRTKTGNRMGIVQFSDQSGQYEAILFSEGLAQFRDLLVPGAAVLLAVGASFENEGLRLRVQSVEPLETALARVQQGVRIFVRDALPVEGIAQRLTRRGEGEVALIVMADKGETEVEIRLPGRFELSGVVVGAIKAVPGVVSVQHV*