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scnpilot_solids2_trim150_scaffold_639_curated_8

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 7164..7856

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H1L9_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 198.0
  • Bit_score: 218
  • Evalue 6.80e-54
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EGH53232.1}; TaxID=629264 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae Cit 7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 198.0
  • Bit_score: 218
  • Evalue 9.60e-54
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 214.0
  • Bit_score: 180
  • Evalue 8.50e-43

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGATCTCGCCGCGCATGCTTGCCCTGATCGGCGAATGGATGCCGCAATTGATCGAGGCGGCGGGCTATACGCTGAAAATGACCGTGCTGGCCTATATGCTGGGCGCGGTCATCGGGCTGGCGCTTGCCCTTGGCGGCATGGCGCGGCAGCGCTGGATCGTGATTTGCTGCCGCGGTTATATCGAGTTCGTGCGCGGCACGCCGACCCTGACCCAGCTTTTCCTGGTGTATTTCGGGCTGACCTCGTTCGGCATTGCCCTGCCGAGCTTCGAGGCCGCCGTGGTGACGCTCGGGCTGCATTACGCCGCCTATATGGCCGAAATTTATCGCTCCGGCATTTCGTCGGTGCATGGCGGCCAGCAGGAGGCGGCCCAGGCCATCGGCATGACGCGCGGCGAGGCGATGCGCTATATCATCCTGCCGCAATCGCTGCGGGTCATCCTGCCGCCGATGGCCAATTCGGCGATTTCGCTGCTCAAGGACACCTCCGTCGCCTCGCTGATCTCCGCGCCGGAGATCATGCTGCGCGCCAACGATCTGGCAAGCCAGTACTACATGCCGATGCAGCTCTACCTGATCACCGGCGCGATGTATTTCGTGCTGGCATATCCGCTGTCGCTCGGTGTGCGCTATCTGGAATGGCTGACGAGCCGCGGCCATCGCAGCACCATTGCCGGCCCGGCCGCCGGATAG
PROTEIN sequence
Length: 231
MISPRMLALIGEWMPQLIEAAGYTLKMTVLAYMLGAVIGLALALGGMARQRWIVICCRGYIEFVRGTPTLTQLFLVYFGLTSFGIALPSFEAAVVTLGLHYAAYMAEIYRSGISSVHGGQQEAAQAIGMTRGEAMRYIILPQSLRVILPPMANSAISLLKDTSVASLISAPEIMLRANDLASQYYMPMQLYLITGAMYFVLAYPLSLGVRYLEWLTSRGHRSTIAGPAAG*