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scnpilot_solids2_trim150_scaffold_3220_curated_6

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 6926..7315

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI0003496C25 similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 127.0
  • Bit_score: 204
  • Evalue 7.50e-50
Putative transcriptional regulator {ECO:0000313|EMBL:EIL90781.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 125.0
  • Bit_score: 201
  • Evalue 5.20e-49
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 125.0
  • Bit_score: 196
  • Evalue 4.90e-48

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGATGCATCGCTGCTTACCGTGCAACCCTCCGCTTCCGAGCCGATCTATCGACAGATCGTGGAGCAGTTGCGGCGCCTGATCGCCGGTGGCCAGTTGGTGGCCGGTGAACTGTTGCCGTCGGTGCGCGAGGTGGCGGGTTTTCATGCGATCAATCCGATGACGGTGTCGCGGGCCTACGGGCTGGCCGAGAGCGAGGGCTTGCTGGAGCGGCTGCGCGGCAAGGGCATGGTGGTGGCGGCGACGCGTCGCTCGGGCCAGTCCGAGAGCCAGCGGCTGGCGCTGCTGGAACCGCAGCTGGCGGCGCTGGCGCGCCATGCGGGGGAACTGGAATTGCCGGCCGAGGCGGTGCTGAACCGGCTTGGCCGCTTGATGAGGAGTCGAGGATGA
PROTEIN sequence
Length: 130
MDASLLTVQPSASEPIYRQIVEQLRRLIAGGQLVAGELLPSVREVAGFHAINPMTVSRAYGLAESEGLLERLRGKGMVVAATRRSGQSESQRLALLEPQLAALARHAGELELPAEAVLNRLGRLMRSRG*