ggKbase home page

scnpilot_solids2_trim150_scaffold_4413_curated_6

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(5099..5800)

Top 3 Functional Annotations

Value Algorithm Source
23S RNA-specific pseudouridylate synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 230.0
  • Bit_score: 434
  • Evalue 1.90e-119
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:AGG90655.1}; EC=5.4.99.- {ECO:0000313|EMBL:AGG90655.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 230.0
  • Bit_score: 434
  • Evalue 8.60e-119
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI78_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 230.0
  • Bit_score: 434
  • Evalue 6.20e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGATCGACATCCTCTACCAGGACGACGCGCTGATCGCGGTGAACAAGCCCGCGAACCTGGCCGTGCATCGCTCGACGTTCGTGGGGCCCGCCGACGCGTTCCTGATCGACCTGCTGCGCGAGCAGGTCGGCGGCAACGTGTACCTGGCGCACCGGCTCGACCGCGCCACCAGCGGCGTGCTGCTGGTGGCGCGCAGCAAGGAGGTCGCCGCCGCGCTTGGCGAGCAGTTCATGCAGCGCACGGTGCACAAGCAATACCTGGTGGTGGTGCGCGGCTGGCCGGAGCCGGCCGAAGGCGTGATCGACTATCCTCTGCCCGGCTCGCGCGAAACCGGCCCGCGCCGCGAAGCGCGCACGCGCTACCGGCGCCTGGCCACGATCGAGGTGCCGATCGCACTCGGCCGCTACCCGCAGCAACGCTACGCACTGCTGCTGGCGGAGCCTGAGAGCGGCCGCTTCCGCCAGATCCGCAAGCACCTGGCGCACATCCATCACCCGGTGATCGGCGACTGCCAGCACGGCCGCGGCGACCACAACCGCCTCTACAAGCAGCACTTTGCCTGCCACCGGATGCTGCTGCACGCGTGGCGGCTTTCGTTCGCGCATCCGGTGAGTGGCGCGCCGATGCAACTGGAGGCGCCGCTGGACGAGGCATTCGCGCGATTGCTGGCGCAGTTCGGCTGGGGCTTGAAGCAGGAGTGA
PROTEIN sequence
Length: 234
MIDILYQDDALIAVNKPANLAVHRSTFVGPADAFLIDLLREQVGGNVYLAHRLDRATSGVLLVARSKEVAAALGEQFMQRTVHKQYLVVVRGWPEPAEGVIDYPLPGSRETGPRREARTRYRRLATIEVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAHIHHPVIGDCQHGRGDHNRLYKQHFACHRMLLHAWRLSFAHPVSGAPMQLEAPLDEAFARLLAQFGWGLKQE*