ggKbase home page

scnpilot_solids2_trim150_scaffold_2677_curated_4

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(5039..5791)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7S1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 250.0
  • Bit_score: 399
  • Evalue 3.10e-108
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL95512.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 250.0
  • Bit_score: 399
  • Evalue 4.30e-108
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 249.0
  • Bit_score: 398
  • Evalue 2.20e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
GTGGCGCGCCTGCCGGCCGATTGGCAGCCCGAGGCCGGCAGCCTCGCCGGTCGCGTGATCCTGGTCACCGGCGCCTATGGCGGGCTCGGCAGCGCGGTGGTGCGCGCGGCCACGCTGGCCGGCGCCACCGTGGTCATCACCGGCAAGCGCAAGCGGCAGCTGGAGAAGCTTTACGACGCGATGGGCGAGGAGGGCCTGGCCGAGCCGGTGATCCATCCGCTGGACATGGAAGTGGCCACGCCGCGCGAGTACGCCGCACTGGCTGAGGGCTTGCAGCGCGACCTCGGCCGTCTCGACGGCATCGTGCATTGCGCGGCCAGTTTCGCCGGGCTCACGCCGATTTCCATGCAGCGGCCGGACGACTGGCTGCGCGCGATGCACGTCAACGTCAACGCGCCGTTCGCCCTGACCCAGGCTTGCATGCCACTGCTGACCGAGGCCGCCGACAGCGCCGTGGTATTCGTGCTGGACAGCCCCGACCTGCTGCGACGTGCACACTGGGGCGGTTACGGCGTGTCCAAGGCCGCGCTGGAGCGGTTGGCGGCGATCCTGCACGAGGAAACCGACGAGACTTCGCTGCGCGTGCACGCGCTGCTGCCCGCGCCGATGCGCACGGCGTTGCGCCGGCTGGCCTATTTCGGCGACGACATCATGCAGCAGCCCACGCCGGACGCCACTGCCGATGCGGCCATCTATCTGCTCGGCCCGCAGGCGCGGGCGGCACGCGGCGCGGTGCTGGACCTTCGCTCGTAG
PROTEIN sequence
Length: 251
VARLPADWQPEAGSLAGRVILVTGAYGGLGSAVVRAATLAGATVVITGKRKRQLEKLYDAMGEEGLAEPVIHPLDMEVATPREYAALAEGLQRDLGRLDGIVHCAASFAGLTPISMQRPDDWLRAMHVNVNAPFALTQACMPLLTEAADSAVVFVLDSPDLLRRAHWGGYGVSKAALERLAAILHEETDETSLRVHALLPAPMRTALRRLAYFGDDIMQQPTPDATADAAIYLLGPQARAARGAVLDLRS*