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scnpilot_solids2_trim150_scaffold_2167_curated_3

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(2254..3474)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 406.0
  • Bit_score: 753
  • Evalue 1.50e-214
RtcB protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 406.0
  • Bit_score: 720
  • Evalue 3.10e-205
RNA-splicing ligase RtcB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 406.0
  • Bit_score: 753
  • Evalue 1.00e-214

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGAGCAACCAACAGTACGAGTTTCTGCATGCCGAAGGCAGCGCCACGCCGATCAAGGGCTGGGTGCATGGCGTGCCGCTGGAAGATGCCGCGAGGCAGCAGCTGCGCAACATCGCCACGCTGCCGTTTGTCGGCCCGTGGGTCGCGGTGATGCCCGACGTGCACCTGGGCAAGGGCGCGACGGTCGGTTCAGTCGTGCCCACGCGGGGCGCGATCATCCCGGCTGCGGTCGGCGTGGACATCGGCTGCGGCATGGCCGCGGTGCGCACCACGCTGCGCGCCAGCGACCTGCCGGACAACCTGGCCCAGCTGCGTTCCAGCATCGAGCGCGGCGTGCCGGTCGGCAACGGCCGTGGTGGCGACCATCACAAGCTGCCGGACAGCATTGAGACGCAACTGGCGCAATCCGGGCTGGTCGCGCGGCTGGAAGCAATCAAGGCGAAGCATCGCAAGATCCGCACCGACAAGCTGGACCGGCAGATCGGCACGCTGGGCGGTGGTAACCACTTCATCGAGGTCTGCCTCGACGAATCGGACGCCGTGTGGGTGATGTTGCACTCGGGTTCGCGCGGCACCGGCAACCTGATTGGTAGCTACTTCATCGAGCGGGCGCGCGAGGAGCTGGCGCAGCGCGTGCTGGGTTTCGACCTGCTGGACAGAGACTTGGCCTTCTTCATGGAAGGCGAAGCATTGTTCGACGACTACGTGGAAGCGGTGTCTTGGGCGCAGGACTACGCCCAGGCCAACCGCGAGGCGATGATGGCGCGGGTGTTGGCCGAGATGCGCCACCGGCTGCCGAAGTTCCAGTTGGAAAAGCTGGCGGTGAACTGTCACCACAACTACGTGCAGAAGGAAACGCACGGTGGCGAGGACTTGCTGGTGACCCGCAAGGGTGCGGTGAGCGCGCGGGCCGGCGAGCTGGGCATCATCCCGGGCAGCATGGGTACGTGCAGCTACATCGTGCGTGGCAAGGGCAATCCGGAAAGTTTCCACAGCTGCAGCCACGGCGCGGGCCGGGTGATGAGCCGTACCGCGGCGCGCCAGCGGATCACGCTGGCGCAGCATCGGGAGGCCACCGCCCATGTCGAATGCCGCAAGGACGCGGCGGTGATCGACGAATCGCCGGCGGCGTACAAGTCGATCGACGCGGTTATGGCGGCGCAGTCCGACCTGGTCGACGTGGTGCACACGCTGCGCCAGGTGCTGTGCGTGAAGGGATGA
PROTEIN sequence
Length: 407
MSNQQYEFLHAEGSATPIKGWVHGVPLEDAARQQLRNIATLPFVGPWVAVMPDVHLGKGATVGSVVPTRGAIIPAAVGVDIGCGMAAVRTTLRASDLPDNLAQLRSSIERGVPVGNGRGGDHHKLPDSIETQLAQSGLVARLEAIKAKHRKIRTDKLDRQIGTLGGGNHFIEVCLDESDAVWVMLHSGSRGTGNLIGSYFIERAREELAQRVLGFDLLDRDLAFFMEGEALFDDYVEAVSWAQDYAQANREAMMARVLAEMRHRLPKFQLEKLAVNCHHNYVQKETHGGEDLLVTRKGAVSARAGELGIIPGSMGTCSYIVRGKGNPESFHSCSHGAGRVMSRTAARQRITLAQHREATAHVECRKDAAVIDESPAAYKSIDAVMAAQSDLVDVVHTLRQVLCVKG*