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scnpilot_solids2_trim150_scaffold_3933_curated_1

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 1..228

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ/competence protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W299_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 74.0
  • Bit_score: 135
  • Evalue 1.90e-29
Type IV pilus secretin PilQ/competence protein {ECO:0000313|EMBL:EIL93590.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 74.0
  • Bit_score: 135
  • Evalue 2.70e-29
type IV pilus secretin PilQ/competence protein similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 74.0
  • Bit_score: 130
  • Evalue 2.50e-28

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
CAGATCGACACGCGCGAGGTGAACACCTCGGCGCTGGTCGACAACGGCCAGACCGTGGTGCTCGGCGGCATCTACGAGGTCAACAAGAGCAACACCGTCTCCAAGGTGCCCGGGCTGGGCGACATCCCCGGTCTCGGCGCGCTGTTCCGCAACACCAAGCGCAGCACCACCAAGGCGGAGTTGCTGATCTTCGTGACGCCGCGCATCCTCAGCGACACCTTGCAGTAA
PROTEIN sequence
Length: 76
QIDTREVNTSALVDNGQTVVLGGIYEVNKSNTVSKVPGLGDIPGLGALFRNTKRSTTKAELLIFVTPRILSDTLQ*