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scnpilot_solids2_trim150_scaffold_16515_curated_3

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(1169..1453)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ64_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 180
  • Evalue 8.50e-43
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 180
  • Evalue 1.20e-42
50S ribosomal protein L4, bacterial/organelle similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 94.0
  • Bit_score: 171
  • Evalue 1.20e-40

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTCTCCGAGCTGGCCCGTCAGGGTCGCCTGAAGGTCGTCGAGAGCTTCGGCGTCGAGTCCCCGAAGACCTCGTTGATGGTTGCCAAGCTGGCCGAGCTGGAAGTTTCCGGTCGCGTGCTGCTGGTGTCCGAAGACGCCTCCGAGGCAGTGTTCCTGGCTGCCCGCAACATCCCCTACATCCATGTGCTGGATGTGATGGGTCTGAACCCGGTCAGCCTGGTCGGTTCCGACCATGTGGTGATGACGGTTGACGCCGTGAAGAAGGTCGAGGAGTGGCTGGCATGA
PROTEIN sequence
Length: 95
FSELARQGRLKVVESFGVESPKTSLMVAKLAELEVSGRVLLVSEDASEAVFLAARNIPYIHVLDVMGLNPVSLVGSDHVVMTVDAVKKVEEWLA*