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scnpilot_solids2_trim150_scaffold_1645_curated_6

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(5034..5618)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WT67_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 194.0
  • Bit_score: 362
  • Evalue 2.50e-97
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 194.0
  • Bit_score: 359
  • Evalue 6.60e-97
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG87823.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 194.0
  • Bit_score: 359
  • Evalue 2.90e-96

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAACGACGCTGATACCGACGCTGATGTCACCGACCGCATGCTGCTGCAGCGGATGTCGACGGGCGACCGCGCGGCGCTGGCGGTGCTCTACCGCGGCTACCACGGCAGGCTGTGCCGCTTCCTGTCCCGGCTGACCCGGCGTCCCGACATCATCGAAGAGGTCATCAACGACTGCTTCTGGATCGCGTGGCAGAAGGCGGGTAGCTTCCACGGCGATTCGCGCGTTTCCACCTGGATCATGGGCATTGCCTACCGCTGCGGGCTGAAGGCGCTGCGTCAGCACGGCGACGAACCGGTCGCGGATGACGCGTTGCCGGAGAACCGCGTGCCCGCCCACAACCCGGACGAGGACCGCGAACTGCGCGATTGGCTGGGCAAGGGCCTGATCCACCTGTCGGTGGACCAGCGCGTGGTGATCGAGCTGGTCTACGGCGTGGGGCACTCGCTGGACGACGTCGCCGCCATCATGCAATGTCCGGTCGGCACGGTGAAGGCGCGGTTGTTCCATGCGCGCGTGAAGCTGCGCAACGTGCTTCCCTCCCTGGCTGGAGACTCGCCGATGCGCGAGGAGAGCGTGCCATGA
PROTEIN sequence
Length: 195
MNDADTDADVTDRMLLQRMSTGDRAALAVLYRGYHGRLCRFLSRLTRRPDIIEEVINDCFWIAWQKAGSFHGDSRVSTWIMGIAYRCGLKALRQHGDEPVADDALPENRVPAHNPDEDRELRDWLGKGLIHLSVDQRVVIELVYGVGHSLDDVAAIMQCPVGTVKARLFHARVKLRNVLPSLAGDSPMREESVP*