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scnpilot_solids2_trim150_scaffold_5129_curated_12

Organism: solids_Rhodanobacter_2

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(10820..11287)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 155.0
  • Bit_score: 288
  • Evalue 4.80e-75
alternative sigma factor RpoH similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 155.0
  • Bit_score: 286
  • Evalue 4.30e-75
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 155.0
  • Bit_score: 290
  • Evalue 1.30e-75

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCAAGAGCAAGAAGCGCCTGGGCTGGATGAACGCCGCCGAGGTGAGCACGGTGGCGAAGGACCTCGGCGTGCCGGAGGCGACCGTGCGCGAGATGGAGTCGCGGCTCTCCGGCCGCGACGTGGGCTTCGAGGCGCCGGTGGATGCCGACGACGACGCCAAGCCGGCACCCGCCGCGTTCCTGATCGACCACGGCGCCGATCCGTACGAGAACGTGGCCGACGAGGACCAGGCCGACAACCAGCTGCAGACGCTGACCGATGCACTGGGGCACCTGGACGCCCGCTCGCGCGACATCATCCAGCGCCGCTGGCTGGACGACGAGAACAAGGCGACGCTGCAGGATCTGGCCGACGAGTACGGCGTTTCCGCCGAGCGCATCCGCCAGGTCGAAGCCAACGCAATGAAGAAGATGCGCGCGCTTTTCGCCGCCTGA
PROTEIN sequence
Length: 156
TKAQRKLFFNLRKSKKRLGWMNAAEVSTVAKDLGVPEATVREMESRLSGRDVGFEAPVDADDDAKPAPAAFLIDHGADPYENVADEDQADNQLQTLTDALGHLDARSRDIIQRRWLDDENKATLQDLADEYGVSAERIRQVEANAMKKMRALFAA*