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scnpilot_solids2_trim150_scaffold_1948_curated_3

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 2992..3573

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE18_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 193.0
  • Bit_score: 285
  • Evalue 3.80e-74
RNA polymerase, sigma subunit, ECF family; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 193.0
  • Bit_score: 285
  • Evalue 1.20e-74
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO44916.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 193.0
  • Bit_score: 285
  • Evalue 4.10e-74

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGAAAGCCGTACAATCCTATCCGGATCACACATTGATCCAGATGTATCTCGAAGGAGATTCCGAATCCCTAACCGTTCTCATTGATCGCTACAAAGAAAAAATCTTCACTTCCATTTTGCTTCTGGTAAGAGACAAATACCTGGCTGAGGATCTTTTTCAGGACACTTTCATCAAGGTTATCGACACCCTTCACACAGGAAGATATACTGATGAAGGAAAATTCTTACCCTGGGTGATGAGAATCGCTCACAATTTATGTGTTGACCATTTCAGAAAAGTAAAACGTCGCCCGGCTATCAAGACCAGCGACGACAGGGACATTTTCGAAGTGCTGAATTTTTCCGAAGCAGGAGCGGAGGAAAAAATGATTCAACGCCAAAGTAATTCCCGTGTAGGTGAAATGCTCGACATGCTTCCTTCAGATCAAAGAGAAGTCATTATTATGAGACATTTTGGTGAACTGAGTTTTAAGGAAATTGCAAAGATTACCAATTGCAGTATTAACACAGCGCTTGGGCGCATGCGGTATGGCCTTATCAACCTCAGGAAAATAATGACTGAAAAACAAATTGCCCTTTAA
PROTEIN sequence
Length: 194
MKAVQSYPDHTLIQMYLEGDSESLTVLIDRYKEKIFTSILLLVRDKYLAEDLFQDTFIKVIDTLHTGRYTDEGKFLPWVMRIAHNLCVDHFRKVKRRPAIKTSDDRDIFEVLNFSEAGAEEKMIQRQSNSRVGEMLDMLPSDQREVIIMRHFGELSFKEIAKITNCSINTALGRMRYGLINLRKIMTEKQIAL*