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scnpilot_solids2_trim150_scaffold_2055_curated_10

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(11365..11943)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 192.0
  • Bit_score: 281
  • Evalue 1.00e-72
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 192.0
  • Bit_score: 279
  • Evalue 8.60e-73
Peptide deformylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB28_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 192.0
  • Bit_score: 279
  • Evalue 2.70e-72

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGATATTACCCATTACAGCTTATGGAAGCCCGGTTTTGAGGGAAGTCGGCAGGGATATTACACCGGAATATGAGGGATTGCAGGAACTCATCAGCAATATGTGGGAAACGATGTATAACAGTAACGGAGTGGGTCTGGCCGCACCTCAGGTAAATAAAAGTATCCGGTTGTTTGTGATGGACAGCATCCAGATTCTGGAAGGGTTGAAAGAAGAAGAGAGGAAAGAATATCCGGGTGATGAGGGTTATAAAGGGGCTTTTATCAATGCACATATCATTGCCAAGGGGGGCGATGAATGGCCGTATAATGAAGGATGCCTGAGCATTCCGAAGATCAGGGAAGATGTTTTGAGGCAACAGACAGTCAACCTCCGTTTCCGGGATGAGAATTTTAAAGAGCATACCATGACTTTCAGGGGAATCACAGCGAGAGTTATCCTTCATGAATATGACCATATAGACGGGAAATTATTTATCGATTATCTGAAGCCCCTGAAAAAAAGCCTGCTGAAACGCAAGCTGAATGACATTTCCAAAGGAAAGATTTCGGTGGATTACAAGATGTCGTTTTACAAATAG
PROTEIN sequence
Length: 193
MILPITAYGSPVLREVGRDITPEYEGLQELISNMWETMYNSNGVGLAAPQVNKSIRLFVMDSIQILEGLKEEERKEYPGDEGYKGAFINAHIIAKGGDEWPYNEGCLSIPKIREDVLRQQTVNLRFRDENFKEHTMTFRGITARVILHEYDHIDGKLFIDYLKPLKKSLLKRKLNDISKGKISVDYKMSFYK*