ggKbase home page

scnpilot_solids2_trim150_scaffold_1506_curated_14

Organism: solids_Sphingobacteriales_2

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(14309..15004)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYE1_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 231.0
  • Bit_score: 311
  • Evalue 6.00e-82
ATP-binding protein {ECO:0000313|EMBL:ETZ19715.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 231.0
  • Bit_score: 318
  • Evalue 8.90e-84
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 231.0
  • Bit_score: 311
  • Evalue 1.90e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 696
ATGCTTATAGAAATTAAAAACCTCAAAAAAATATACAATCAAAAAACGGTTGTGGACATTCCGTCGTTATCTATTAATGAAGGTGAGTTGATTGGACTCGTAGGAAATAACGGAGCCGGCAAGACCACTCTTTTCAGGTTATTTCTGGATTTAATCAGAGCCGACGAGGGTGTTGTATTGTCCAAAGGAAATGATGTTTCCAAAGATGACAATTGGAAATCTTACACAGGATCTTATCTCGATGAAGGATTCCTGATTGATTACCTGACACCCGAAGAGTATTTTCAATTCATTGCGGAAATCAATAACATTTCTCAATCAACTCTTGTTGAAAGAATCAAACCTTTCAAAGAAATATTCAATGATGAAGTTCTCAATAAAGGCAAATACATCCGTGACCTGAGCAAGGGAAATAAAAACAAAGTCGGTATTGCAGCGGCTATGCTGATTCAGCCCGAATTACTGATTCTTGATGAACCCTTTGCAAACCTGGATCCCACCACCCAAATACGCCTGAAAAAACTGATTTCAGAAATCAAGGCAAGGGATGTCACCATCATCATCAGCAGCCACGACCTCAACCATGTTACAGAGGTATGTGATCGCATTATTCTTCTCGAAAAAGGAATCGTTATCAAAGATTCCGAAAAGACAGAAGGTACATTGAAGGAATTGGAAAATTATTTTACGGTATAA
PROTEIN sequence
Length: 232
MLIEIKNLKKIYNQKTVVDIPSLSINEGELIGLVGNNGAGKTTLFRLFLDLIRADEGVVLSKGNDVSKDDNWKSYTGSYLDEGFLIDYLTPEEYFQFIAEINNISQSTLVERIKPFKEIFNDEVLNKGKYIRDLSKGNKNKVGIAAAMLIQPELLILDEPFANLDPTTQIRLKKLISEIKARDVTIIISSHDLNHVTEVCDRIILLEKGIVIKDSEKTEGTLKELENYFTV*