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qh_10_scaffold_10896_1

Organism: QH_10_halophilic_archaeon_J07HX64_68_12

partial RP 18 / 55 MC: 5 BSCG 14 / 51 MC: 1 ASCG 21 / 38 MC: 2
Location: comp(1..1209)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase beta subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI8_HALMD similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 400.0
  • Bit_score: 694
  • Evalue 7.40e-197
DNA-directed RNA polymerase subunit beta'' similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 400.0
  • Bit_score: 694
  • Evalue 2.10e-197
RNA polymerase beta subunit {ECO:0000313|EMBL:ACV46649.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 400.0
  • Bit_score: 694
  • Evalue 1.00e-196

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Taxonomy

Halomicrobium mukohataei → Halomicrobium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1209
ATGGACACGGACACACGCCGTGTCATCTCCCGGGAGTACTTCTCCCGAGAGCGGCTGGCGGAGCATCACTTTCGGTCGTTCAACGGCTTTCTCGACACGGGGATGCAGCAGGTGGTCGACGAGAAAGAGACGATCGACACGGACATCGGCGACAAGGAGGGCGAGGAGCCGGTGTACGTCGAGTTGGGTGACGTCCGGGTGGTGACACCGAGGGTTCGCGAGGCCGACGGGAGCGAGGAGCTGCTGTACCCACAGGAGGCCCGTCTCCGCAACATCACCTACTCCGCGCCGGTGTTCATGGAGATGGCGGTCGTCGTCGGCGGCGAGGAGACCGAGGAGGAGATCGTCGACCAGACCGAGACGAAGGTCGGACGCATGCCGATCATGATCGGGTCCGACAAGTGCAACATCGCCAACTTCGACGATCAGGACCTCATCGACATCGGGGAAGACCCCGCCGACCCCGGCGGGTACTTCATCGTCAACGGGTCCGAGCGGGTTCTGATGACGAGCGAGGATCTCGCGCCGAACAAGATCCTGGCCGAAACGGACACGAAGTACGGCGACGACGTACAGGTCGCAAAGACGTTCTCCCAGCGCCGTGGGTACCGGGCGCTGGTGCTCACCGAGCGGACCCGCGACGGTCTGCTCGAGGTTTCGTTCCCGTCCGTGTCGGGCAGTGTCGACTTCGTGACGCTGGTCCGGGCGCTCGGGCTCGAATCCGACGAGGAGATCGTCCACCGGGTCAGCGACGACCCCGAGATCGTGAAGTTCATGCTCGAAAACCTGGAGGCCGCGGACGTCCAGACGACCGAGGAGGCGATCGAGACGCTCGGCAAACGGGTCGCCTCGGGCCAGGGGAAAAACTACCAGCTCAAGCGCGCAAACTACGTTATCGACCGGTATCTGCTCCCGCACCTCCACGAGGAGGGGGTCGAGGAGGAGGATGTCCGGATCAACAAGGCGTACTATCTCTGCCGGATGGCGGAGGCCTGTTTCGAGCTGGCGCTGGGCCGGCGCGACGCCGACGACAAGGACCACTACGCGAACAAGCGGCTGAAGGTGAGCGGCGACCTGATGCGGGATCTGTTCCGGACGGCGCTCAACAAGCTCGCCCGGGACGTGAAATACCAGCTCGAAACAGGCCTCCGCCATCCGGCAGAGATAGTACGCCTTGTTGATCCGGACATCCTCCTCCTCGACCCCCTC
PROTEIN sequence
Length: 403
MDTDTRRVISREYFSRERLAEHHFRSFNGFLDTGMQQVVDEKETIDTDIGDKEGEEPVYVELGDVRVVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMAVVVGGEETEEEIVDQTETKVGRMPIMIGSDKCNIANFDDQDLIDIGEDPADPGGYFIVNGSERVLMTSEDLAPNKILAETDTKYGDDVQVAKTFSQRRGYRALVLTERTRDGLLEVSFPSVSGSVDFVTLVRALGLESDEEIVHRVSDDPEIVKFMLENLEAADVQTTEEAIETLGKRVASGQGKNYQLKRANYVIDRYLLPHLHEEGVEEEDVRINKAYYLCRMAEACFELALGRRDADDKDHYANKRLKVSGDLMRDLFRTALNKLARDVKYQLETGLRHPAEIVRLVDPDILLLDPL