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qh_10_scaffold_2115_1

Organism: QH_10_Halosimplex_carlsbadense_67_22

near complete RP 30 / 55 MC: 3 BSCG 26 / 51 MC: 1 ASCG 34 / 38 MC: 1
Location: 340..648

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor TFB 4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKD9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 102.0
  • Bit_score: 147
  • Evalue 8.60e-33
Transcription initiation factor TFB 4 {ECO:0000313|EMBL:EMA45204.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 102.0
  • Bit_score: 147
  • Evalue 1.20e-32
putative transcription factor protein TFIIB repeat similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 102.0
  • Bit_score: 138
  • Evalue 1.10e-30

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 309
ATGTACAGCGCCCGCGACCAGGTGGCCAACCAGGCCTGGCTGGACGAACTCGAGTCGGCTGCCGACAGCCTGGACATGTCCAGTGGCGCCAGGTCACGTGCTGGCGACCTCTTTCTCTCCAATCTGCCCGACGACGAGCGCTCGAAGCGAGCGGTCCTCGCGGCCAGTCTCTACGTCGCGGGGTTGACCGAGGGCGACCGCCGGTCACAGGCGGCCGTCGCCGACGCCGTCGGCGTCACCCGCCTTACCGTCCAGCAGCGCTGGAAACCGATCCTGGAGTCGGCCGGCCTCGACGCGCCCGAGTGGTGA
PROTEIN sequence
Length: 103
MYSARDQVANQAWLDELESAADSLDMSSGARSRAGDLFLSNLPDDERSKRAVLAASLYVAGLTEGDRRSQAAVADAVGVTRLTVQQRWKPILESAGLDAPEW*