ggKbase home page

qh_1_scaffold_1349_6

Organism: QH_1_Halobacteria_63_10

partial RP 19 / 55 BSCG 13 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(4249..5826)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein AU-1 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUN9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 523.0
  • Bit_score: 440
  • Evalue 1.90e-120
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 523.0
  • Bit_score: 440
  • Evalue 2.70e-120
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 525.0
  • Bit_score: 430
  • Evalue 7.40e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1578
GTGACCGTTCGGGCTCGGGTCCGCGGAATCTATGCTACCGCCCTCACGCGACTGCTCCGCGAGCGAGGGATTGAGGTCGTCCAGCCCTCCGCGGCGATCGCGGCACGCTTCGGATTCGACGCCGCTGCGGACAGGGACGAAGCTGATCCGGAGGGCTACGACGCCGTGGTTTCGACGACCGACGACCGCCTCGGCATCGGCCTGAGCGGCGACGGGGAGGCGGTGGCGACGCTGCGCGAGATTCTCTCGGACCTTGCGATCGATACGTTCGCGTACGCCGACGACACTTCCCGAGAAGCGGTCGTCGAGGGCGTCGTGACCGGCACGTGCGGGGGCGGCGCGCGCGTCGATCTCGGGTCCCGCGGGGGGTACCTATCGGCCCACGCGATCGACGGGGAGGTCGAGGAAGGCGAGTGCTGCCGGGTGCAGGTCGTCGAGCCTGCTCCGCCCTGGCGCGACGAGCGGCCGCGCCTCGATACCGGCGTTCGCCTCGACGGCGGCGGCCTCCTCGAACTCCGCCGCGAGGGCGGTTCGGACGCCGGGACCGATGGGGGCTCGGACCCGGACTCCGATTCGGGTTCAGCGTCGAAATCGTCGCACCCTGACCGGCGGACGACGATCGGGACCGGGGACGTAATCGACCTCCTCCCCACGGATGTTCCTAGTGGGTGGCGCGCCCGGCTCACTGAACGGGGCGACGAGGCCTCCTTCGACGCGCTCGACGCGGCGCTCGCCGACGTCGCGACCCGGGCGGCGGGCCTCGACAGGGCGCTCGCGGCCGACGCGGAGGAGGCGACCGACACGGAGGGGACGGCTGACACGGAGAGAACGGCCGGACCGGCGACCGACGCTCCTCGCGAGCTGTGGACTGGCCGGGAGACGACCTGGATACGGCTCGGCCGGCGGTCGCGTTTCGCGCTCGACGAGCATCGGCGAGCGGTGACCGTGACGATGGCCGGCCATCATCGGATCAAGGCGGGGACTGATAGCGCGAGCGCCGCCGTCGACTTCGCCGAGAGCGCCTGTGGAGCGGCCGTCGAGCCGGCCGACATGGACGACGGCAGCGACGAGGACGACCTCGATTTCCCCCTTGGCGTTACGACGCGCCAGTTCGGACCCCGGGAGGGCGAGCGGGTCGCGATCGCCCACGGGAAACCCGACGGCCGCGAGATCGTCCTCGGCCGGGGCGAGGTCTCGACGATCGATCCCGACGGCACGCTCGTGCTCCGCCGGGAGATGAGTTCGAGGGGCGTCTACGACGGCATCGGGACCGACCGACGGGCAGGCGACGTCGCGATTACGCGCTTCAAAGAGGGCCGGTGGTGGTACCAGACCCGCTATCGAAGCGCCGATGGCGAGCCCCGGGGGACCTACGTCAACGTCTGTGCGCCCGTCGAACTCTTCCCCGATGCCGTGCGATACGTCGATCTGTACGTCGACGTGGTGAAGCGGCCCGACGGCACGGTCGAGCGCGTCGACGACGACGAACTCAACGCCGCGGTCGCGGAGGGCCTCGTGAGCGACCCCCTTACGTCGAAAGCCCGATCGGTCGCCGCGGCCATCGAAGCGGCGCTCTGA
PROTEIN sequence
Length: 526
VTVRARVRGIYATALTRLLRERGIEVVQPSAAIAARFGFDAAADRDEADPEGYDAVVSTTDDRLGIGLSGDGEAVATLREILSDLAIDTFAYADDTSREAVVEGVVTGTCGGGARVDLGSRGGYLSAHAIDGEVEEGECCRVQVVEPAPPWRDERPRLDTGVRLDGGGLLELRREGGSDAGTDGGSDPDSDSGSASKSSHPDRRTTIGTGDVIDLLPTDVPSGWRARLTERGDEASFDALDAALADVATRAAGLDRALAADAEEATDTEGTADTERTAGPATDAPRELWTGRETTWIRLGRRSRFALDEHRRAVTVTMAGHHRIKAGTDSASAAVDFAESACGAAVEPADMDDGSDEDDLDFPLGVTTRQFGPREGERVAIAHGKPDGREIVLGRGEVSTIDPDGTLVLRREMSSRGVYDGIGTDRRAGDVAITRFKEGRWWYQTRYRSADGEPRGTYVNVCAPVELFPDAVRYVDLYVDVVKRPDGTVERVDDDELNAAVAEGLVSDPLTSKARSVAAAIEAAL*