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gwa2_scaffold_17622_5

Organism: GWA2_CP_71_10_partial

partial RP 33 / 55 MC: 1 BSCG 29 / 51 MC: 1 ASCG 5 / 38 MC: 2
Location: 1681..2991

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Actinobacteria_67_10_curated UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 389.0
  • Bit_score: 590
  • Evalue 2.30e-165
RNA polymerase sigma factor, sigma-70 family KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 414.0
  • Bit_score: 448
  • Evalue 2.20e-123
RNA polymerase ECF-subfamily sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 458
  • Evalue 2.00e+00

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
TTGCCGCTGGCTGAGCAAGCGCCGGCAGGCATCGGGCGCGACGGTCCGGTCGCGTTCGATGCTGTCGACCGCATCTTCCGCGGGGAATCGGGCCGGGTCGTCGCCGGGCTGATCCGGGCAATCGGCGACTTCGACCTGGCCGAGGAATCGGTCCAGGACGCCTTCCTGGCCGCACTCGAGCACTGGCCGGCAGAAGGGCTGCCGGCCAATCCCGGTGCCTGGATCACGACCACCGCTCGGCGCAGGGCGATCGACCGCCTGCGGCGCGCCCGGCGCCTGACCCAGAAGACGGAGGCGCTGGCTCAGCTGATGGCTGCCGATTCGGCCGACACGATGCCCGGGCCCGAGCAGCTGGCCGACCGGCCGGCCGTGGACGATGACCGACTCCGACTGATCTTCACCTGCTGCCACCCTGCCCTGGCGGCCGACGCCCAGGTGGCACTCACGCTCCGGCTGCTGGGCGGCCTGCGCACGCCCGAGATCGCGCGCGCCTTCCTTCTGCCGGAGGCGACGCTCGCCCAGCGTCTGGTGCGCGCCAAGCGCAAGATCCGCGAGGCGGGCATCCCCTACCGCGTGCCCGGCGCGGAAGACCTGCCCGACCGGCTCGGCTCGGTCCTGCACGTGCTCTACCTGGTCTTCAACGAGGGCTACTCGGCGACCGCCGGCGCGACGTTGGTCCGGCGCGAGCTGGCCGCGGAGGCGATCCGTCTGGCCCGGCTGCTGGCGCAGCTGATGCCCGATCAACCCGAGGTGCTCGGCCTGCTCGCACTGCTGCTGCTCCAGGACTCGCGCCGCGACGCGCGCCAGACCGCGACGGGCGAGCTGGTGCTGCTGGCGGACCAGGATCGTTTGCGCTGGGACGGGGCACGCATCGCGGAGGGACTGGCGACCCTCGAGCGGGCCGCCTTCCTGGCCGCGCCGGGCGCGTACCAGTTGCAGGCCGCGATCGCCGAGCACGCTCGCGCCACTACTGCCGCGGCGACAGACTGGCCACGCATCGTGCGCCTGTATGACCGGCTGCTGGCCACGCTGCCGAGTCAGGTCGTGGCGCTCAACCGCGCGGTCGCCGTCTCGATGGCATTCGGCCCGGAACGCGGCCTCGCCCTCGTCGACGAGATTGCCGCGGCGGGCGAGTTGGGCGACTACCACCTGCTCCACTCGACGCGCGCAGAACTGCTTCATCGCGTGGGCCGAGACGAAGAGGCGCGGGCAGCGTTCCAGCGGGCGCGCGACCTGGCTACGAACGACGCCGAGCGCACCCACCTCGAGCGCCGCGCCGCTGCGATTGACGGGTCGTCGTCGCCGACCTAG
PROTEIN sequence
Length: 437
LPLAEQAPAGIGRDGPVAFDAVDRIFRGESGRVVAGLIRAIGDFDLAEESVQDAFLAALEHWPAEGLPANPGAWITTTARRRAIDRLRRARRLTQKTEALAQLMAADSADTMPGPEQLADRPAVDDDRLRLIFTCCHPALAADAQVALTLRLLGGLRTPEIARAFLLPEATLAQRLVRAKRKIREAGIPYRVPGAEDLPDRLGSVLHVLYLVFNEGYSATAGATLVRRELAAEAIRLARLLAQLMPDQPEVLGLLALLLLQDSRRDARQTATGELVLLADQDRLRWDGARIAEGLATLERAAFLAAPGAYQLQAAIAEHARATTAAATDWPRIVRLYDRLLATLPSQVVALNRAVAVSMAFGPERGLALVDEIAAAGELGDYHLLHSTRAELLHRVGRDEEARAAFQRARDLATNDAERTHLERRAAAIDGSSSPT*