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qh_1_scaffold_1238_17

Organism: QH_1_Haloarcula_66_16

near complete RP 23 / 55 MC: 3 BSCG 18 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: comp(13215..13793)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C small subunit n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KXP5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 192.0
  • Bit_score: 337
  • Evalue 6.50e-90
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=12 similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 192.0
  • Bit_score: 337
  • Evalue 9.10e-90
rfcS; replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 192.0
  • Bit_score: 336
  • Evalue 4.10e-90

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Taxonomy

Haloarcula amylolytica → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 579
ATGGAGCAGTTCTCGAACAACGTCCGGTTCATCCTCTCGTGTAACTACTCCAGTCAGATCATCGACCCCATCCAGTCCCGGTGTGCCGTGTTCCGCTTCTCGCCGCTGTCGGACGAGGCGGTCGAGCAGGAGAGTCGCCACATCGCCGCCGAGGAGGGTATCGAACTGACCGACGACGGCCTCGACGCGCTGGTGTACGCCGCGGCGGGCGACATGCGCAAGGCCATCAACGGGCTGCAGGCGGCCTCGGTCAGCGGCGACGTGGTCGACGAGTCGGCGGTGTACGCCATCACCTCCACGGCGCGGCCCGAGGAGATACACGGGATGGTCCAGTCGGCGCTCGACGGCGATTTCACCGCGGCGCGGGCGACGCTCGACCGCCTGCTGACCGAGGAGGGCATCGCCGGCGGCGACGTCATCGACCAGCTCCACCGCTCCATCTGGGAGTTCGACGTGGACGACCGGGCGGCCGTTCGCATCCTCGAACGGGTGGGCGAGACCGATTACCGGATCACGCAAGGGGCCAACGAACGCGTGCAACTCGAAGCGATGCTCGCCTCGCTGGCGAACCCCGAGTAG
PROTEIN sequence
Length: 193
MEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLSDEAVEQESRHIAAEEGIELTDDGLDALVYAAAGDMRKAINGLQAASVSGDVVDESAVYAITSTARPEEIHGMVQSALDGDFTAARATLDRLLTEEGIAGGDVIDQLHRSIWEFDVDDRAAVRILERVGETDYRITQGANERVQLEAMLASLANPE*