ggKbase home page

qh_1_scaffold_1812_4

Organism: QH_1_Haloarcula_66_16

near complete RP 23 / 55 MC: 3 BSCG 18 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: comp(3027..3893)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=5 Tax=Haloarcula RepID=Q5V147_HALMA similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 321.0
  • Bit_score: 507
  • Evalue 7.10e-141
tfbD; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 321.0
  • Bit_score: 507
  • Evalue 2.00e-141
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 321.0
  • Bit_score: 507
  • Evalue 9.90e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloarcula argentinensis → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 867
ATGAACGAGTCAATACGAACGCGACAGCGAACCGGAGAGGAAGAGACGGAGTCCACGGAGTCGGAATCGACGGCCTGCCCCGAGTGGCGCGCTTTCGACTCCAGCGAGAAGGACCAGAAGTCCCGCGTCGGTGCCCCGACGACGAACATGATGCACGACAAGGGACTGTCGACCAACATCGACTGGCGCAACAAGGACGCCTACGGCAACTCCCTGTCGGGCAAGCAGCGACAGAAGATGCAGCGCCTGCGCAAGTGGAACGAGCGCTTTCGAACTCGGGACTCCAAGGAGCGCAACCTGAAGCAGGCGCTGGGCGAGATAGACCGGATGGCCTCGGCGCTGGGGCTGCCCGAGAACGTCCGCGAGACGGCCAGCGTCATCTACCGTCGCGCGCTCGACGAGGACCTTCTGCCGGGTCGCTCCATCGAGGGCGTCTCGACCGCGTCGGTCTACGCCGCCGCCCGACAGGCCGGCGTCCCGCGGAGCCTCGACGAGATTACCGACGTGTCCCGCGTCGAGAAAAGCGAGATCGCCCGGACCTACCGCTACGTCGTCCGCGAACTGGGCCTCGAAGTGAGGCCGGCCGACCCCGAGAGCTACGTCCCCCGGTTTGCCTCCTCGCTGGAGCTCTCCGACGAGGCCGAACACCGCGCCCGACAGCTGCTCCAGAACGCCAAGGAACAGGGCGTCCACTCCGGAAAGTCGCCGGTCGGACTCGCCGCCGCGGCCGTCTACGCCGCCGCGCTCCTGACGAACGAGAAGACGACACAGGCTGCCGTCAGCGAGGTCGCCGACATCTCCGAAGTGACGATTCGGAACCGCTATCACGAACTGCTGGAGGCCGAGCAGGACCTCCCCGTCGCATAA
PROTEIN sequence
Length: 289
MNESIRTRQRTGEEETESTESESTACPEWRAFDSSEKDQKSRVGAPTTNMMHDKGLSTNIDWRNKDAYGNSLSGKQRQKMQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVSTASVYAAARQAGVPRSLDEITDVSRVEKSEIARTYRYVVRELGLEVRPADPESYVPRFASSLELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQDLPVA*