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qh_1_scaffold_4060_5

Organism: QH_1_Haloarcula_66_16

near complete RP 23 / 55 MC: 3 BSCG 18 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: comp(3920..4756)

Top 3 Functional Annotations

Value Algorithm Source
Rhodopsin n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1H6_HALMD similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 273.0
  • Bit_score: 441
  • Evalue 7.80e-121
rhodopsin similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 273.0
  • Bit_score: 441
  • Evalue 2.20e-121
Rhodopsin {ECO:0000313|EMBL:ACV47184.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 273.0
  • Bit_score: 441
  • Evalue 1.10e-120

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Taxonomy

Halomicrobium mukohataei → Halomicrobium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 837
ATGTCAGCTTCAGCGACCGCAACGGCAGCACTGCTCCAGGCCACGCAGGCGGAGGCCGTCGAGGCAATCCAGAACGACGTGTTGCTGTCGTCGTCACTCTGGGTGAACATCGCCCTCGCCGGGGTTTCGGCGCTCCTGTTCGTGTACATGGGTCGGAACGTGACCGATCCCCGGGCGAAGTTCATCTTCGCGGCGACGCTGATGATTCCGCTGGTCTCCATCTCCAGTTACACCGGGCTCGTCTCGGGACTGACAGTCGGGTTCACCGAGATGCCGGCCGGCCACGCCCTGGCCGGCGAGGAAGTGATGAGCCAATGGGGTCGCTATCTCACGTGGGCGCTCTCGACACCGATGATTCTGCTCGCGCTCGGACTGCTGGCGAGGGTCGACACTGCCGACCTCTTTACCGTCATCGCCGCCGACATCGGGATGTGTGTCACCGGCCTCGCGGCCGCGCTCGTCACCTCGTCGTACGCGCTCCGCTGGTTCTTCTACGTCATCAGCTGTGCGTTCTTCGTCGTCGTGCTGTACGCGATCCTCGTCGAGTGGCCCAAGTCCGCCGCCGCGGCCGACACCGACGAGATATTCGGGACGCTCCGGGCGCTGACGGTCGTGCTGTGGCTCGGCTATCCGATCATCTGGGCGCTTGGCGTCGAGGGACTCGCGATAGTCCAGAGCGTCGGCATCACCTCCTGGGGGTACTCGGCGCTGGACATCGGCGCGAAGTACGTCTTCTCGTTCCTGCTGCTGCGCTGGGTCGCGGCCAACGAGGGCGTCGTCGCCGAGACCGGCGTGACGACCGGTGCCGAACCGGGCGCCGCTGCCGTTGATGACTGA
PROTEIN sequence
Length: 279
MSASATATAALLQATQAEAVEAIQNDVLLSSSLWVNIALAGVSALLFVYMGRNVTDPRAKFIFAATLMIPLVSISSYTGLVSGLTVGFTEMPAGHALAGEEVMSQWGRYLTWALSTPMILLALGLLARVDTADLFTVIAADIGMCVTGLAAALVTSSYALRWFFYVISCAFFVVVLYAILVEWPKSAAAADTDEIFGTLRALTVVLWLGYPIIWALGVEGLAIVQSVGITSWGYSALDIGAKYVFSFLLLRWVAANEGVVAETGVTTGAEPGAAAVDD*