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qh_1_scaffold_290_2

Organism: QH_1_Halobacteriales_66_30

partial RP 31 / 55 MC: 4 BSCG 27 / 51 MC: 3 ASCG 30 / 38 MC: 3
Location: comp(401..598)

Top 3 Functional Annotations

Value Algorithm Source
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 65.0
  • Bit_score: 111
  • Evalue 9.40e-23
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 65.0
  • Bit_score: 119
  • Evalue 1.60e-24
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 65.0
  • Bit_score: 119
  • Evalue 2.20e-24

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 198
ATGGGTGACCGGCTCGTCTGTCGGGAGTGCCACCGCGTCCAGGAAACCGAGGAGGCCGAGGCCTGCGAGAGCTGCGGGTCGACCTCGCTCACGGAGGACTGGGCTGGCTACGTCGTCATCAGCCACCCCGAACAGAGCGACATCGCCGAGGAGATGGGCGTCACCGAGCCCGGGACGTACGCCCTGAAGGTCCGGTAG
PROTEIN sequence
Length: 66
MGDRLVCRECHRVQETEEAEACESCGSTSLTEDWAGYVVISHPEQSDIAEEMGVTEPGTYALKVR*