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qh_1_scaffold_237_26

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: comp(22806..24317)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 510.0
  • Bit_score: 745
  • Evalue 4.90e-212
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 503.0
  • Bit_score: 611
  • Evalue 2.90e-172
Probable tRNA pseudouridine synthase D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 510.0
  • Bit_score: 745
  • Evalue 3.50e-212

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1512
ATGCGCGAGGCACACGCCGTCGAGCGGGCGGTCGGGATGGAGTACTACGTCAGCGACACCCCCGGCGTCGGCGGCCACCTCCGGGAGCGCCCCGAGGACTTCCGCGTGACCGAGGTCGAGGCCGTCGACCCGGAACCGCTGGACGCCGACCCCGGCGGCTACGCGAACGTCCTCGCCCGCGTAACGCTCCGGCAGTGGGACACCAACGACTTCGCCGGGGAACTCTCCGACCGCCTCGGGATCTCCCGCGAGCGCGTCTCGTGGGCCGGCACGAAGGACAAACACGCTGTCACGACACAGCTGTTCACCGTCGAGACAGTCGAACCCGAGGAACTGCGCGCGGTCGAGATCCGCGACGCCGAGGTCGAACTGCTGGGCCGGACCGGCCGCCCCGTCCTCTTCGGCGACCTCGCGGGCAACGCCTTCGAGATCGTCGTCCGCGACGCCGAGTCGCCCGAGGACGCCCCGCCGACCACCGACGACCTCCGCGCGTTCGCTCGGGGCGACGCGAACGGGGACCACCGGTCGGCCGCGTCGGCCGAGACGGCCGACGAGACGACCGTCGGCGTCCCCAACTACTTCGGCCAGCAGCGGTTCGGGAGCAAACGGCCCGTCACCCACGAGGTCGGCCTCGAGATCGTCCGCGGGAACTGGAAGGGCGCGGTGCTGGCCTACGTCGGCAGTCCAGCGGAGCGCGAACCCGAGTCGACGCGGGAAGCACGGCGGTATGTCGACCGCGAGTTGCGACGCGACTCGGACACGTCGAGCGGTGACGAACCGCCAGACGAAACCGAAGACTGGACGGGCGCGCTGGAGCGACTGCCACGCCGGCTCGGCTTCGAGCGGTCGATGTGTCACCGGCTAATCGAACGGAGCGATGACGGGAGCGAACTCGATGACGAGGACTACCGCGCCGCACTCGAAGCGGTCCCCTCGAACCTCCAGCGGCTGTTCGTCAACGCCGCCCAGTCCTACGCGTTCAATCGCATCCTCTCGGCGCGGCTGGACCGGGGACTCCCCTTTCACGAACCCGTCGCGGGCGACGTGGTGTGTTTCTCGGACGCTGACGCGCCCGAGGGGTTCGCGCTCCCCGACACCGACCGCACCCAGCGCGTGACCGAGGACCGGCTGCGGACGGTCCGCCGCCACTGCGAACGCGGTCGAGCGTTCGTCACCGCCCCGCTGCTCGGCACCGAGACGGAACTGGCCGACGGCGAACCGGGCGAGATCGAGCGCGAAGTGCTCGCCGACCTCGACCTCTCGCCCGCGGACTTCGACCTGCCCGGCGAGTTCGAGTCGACGGGGACGCGCCGAGCGGTCCTCCTCCGGACGGACCTGACCGTCGAACGCGGCGTCGTCGGTGACACCTGTTGCATCGACGGTGACACCGACGACGCGGACGGCGACGGCGACGAGGGTGACGCCCTGACCTTCGCGTTCGCGCTTCCCAAGGGGAGTTACGCGACGGTCGTCCTCCGGGAGTACCTGAAACGGGACCCCGAGGACCTGTGA
PROTEIN sequence
Length: 504
MREAHAVERAVGMEYYVSDTPGVGGHLRERPEDFRVTEVEAVDPEPLDADPGGYANVLARVTLRQWDTNDFAGELSDRLGISRERVSWAGTKDKHAVTTQLFTVETVEPEELRAVEIRDAEVELLGRTGRPVLFGDLAGNAFEIVVRDAESPEDAPPTTDDLRAFARGDANGDHRSAASAETADETTVGVPNYFGQQRFGSKRPVTHEVGLEIVRGNWKGAVLAYVGSPAEREPESTREARRYVDRELRRDSDTSSGDEPPDETEDWTGALERLPRRLGFERSMCHRLIERSDDGSELDDEDYRAALEAVPSNLQRLFVNAAQSYAFNRILSARLDRGLPFHEPVAGDVVCFSDADAPEGFALPDTDRTQRVTEDRLRTVRRHCERGRAFVTAPLLGTETELADGEPGEIEREVLADLDLSPADFDLPGEFESTGTRRAVLLRTDLTVERGVVGDTCCIDGDTDDADGDGDEGDALTFAFALPKGSYATVVLREYLKRDPEDL*