ggKbase home page

qh_1_scaffold_2853_3

Organism: QH_1_Halobacteriales_64_38

near complete RP 33 / 55 MC: 4 BSCG 28 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: 1128..1685

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 183.0
  • Bit_score: 232
  • Evalue 5.20e-58
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 183.0
  • Bit_score: 232
  • Evalue 3.70e-58
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 182.0
  • Bit_score: 221
  • Evalue 2.40e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 558
ATGCGTGCGTTCGTCAGCGTCGACCCCGAGGGACTCGAAGCGGAGATCGGAGCCGTTCAGCGCGAGTTCGAGGAAGTGAGCGGGCTCGATTTCGTCCCCCCGGCGGACGTTCATATCACGCTCTCGTTTCTCGGCGACGTCGAGGGCGGAGAGCTGGCGGCGGTCACCGACGCCATCGGCGAGGCAGTGGCCGAAAGCGGCGTGTCGCCGTTCGAAGCCGAGTTCCGTGGTTTAGGAGCCTTTCCGAGCCCCGAGTACATCCGCGTGCTCTGGGTCGGAGTGGGTACGGGAAGCGAGGAACTGACCCGGCTCAACGAGCGAATCGAATCCCGCACCGTGGAGTTGGGCTTCGAACCCGACGACCACGAGTTCACGCCGCACGCGACGGTCGCCCGGATGCGCCACGCCGGCGGGAAAGAACTCCTCCAGCGAAAGCTCGACGAACTCGATCCGACCGTTGGGACGAGGGAGATCGAGGAGGTACATCTGACCGAGAGTACGCTCACCGACGAGGGGCCGGAGTACGAGACGATCGAACGGTTCTCGCTATCGGCATGA
PROTEIN sequence
Length: 186
MRAFVSVDPEGLEAEIGAVQREFEEVSGLDFVPPADVHITLSFLGDVEGGELAAVTDAIGEAVAESGVSPFEAEFRGLGAFPSPEYIRVLWVGVGTGSEELTRLNERIESRTVELGFEPDDHEFTPHATVARMRHAGGKELLQRKLDELDPTVGTREIEEVHLTESTLTDEGPEYETIERFSLSA*