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qh_1_scaffold_4290_11

Organism: QH_1_Halobacteriales_65_13

partial RP 24 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 21 / 38 MC: 1
Location: comp(8676..9794)

Top 3 Functional Annotations

Value Algorithm Source
NMD protein affecting ribosome stability and mRNA decay n=1 Tax=halophilic archaeon J07HX64 PF34_9EURY">RepID=U1PF34_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 366.0
  • Bit_score: 513
  • Evalue 2.20e-142
NMD protein affecting ribosome stability and mRNA decay {ECO:0000313|EMBL:ERH08694.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 366.0
  • Bit_score: 513
  • Evalue 3.00e-142
nonsense mediated mRNA decay-like protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 371.0
  • Bit_score: 510
  • Evalue 3.00e-142

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Taxonomy

halophilic archaeon J07HX64 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1119
ATGAGCCGATCGGGCGCGTTCTGTCCACGGTGTGGCGACCCCATCGAACGGCCAGCCGAGAGCGCCGACCGGGCGTCCGAGAAGGACAGCTCGCTGTGTGACAGCTGTTACATCGACGAGTACGACCTCGTCGACGCGCCCGACCGGGTCGAGATCCGCGTCTGTTCGAGGTGTGGCGCGGTCCACCGCGGCAATCGCTGGGTCGACGTCGGCGCTGAGGACTACACGGACGTTGCCATCGAGGAGGTAACAGAGGCGCTGGGCGTCCACGTCGCCGCGAGCGGGATCTCCTGGCAGGTCGCCCCCGAACAGGTCGACGAGACCACCATCCGCATGCACTGCCAGTTCTCCGGCGTGTTGCGCGAGACGCCGATCACCGAGGAGGTCGTCGTGCCGGCCAAGATCGGCCACGAGACGTGCGAGCGGTGTGGCCGGATCGCCGGCGGCTCCTACGCGAGCGTCGTCCAGGTCCGGGCGCGGGACCGTGACCCGGACAACACCGAAACCGGACGGGCGCGGGAGGTCGCACACGAGCGGGTGGACGCCCTCGAAGCCAAGGGCGACCGCGAGGCGTTCGTCAGCGAGATAACCGAGGTCGAGGGCGGGCTGGACATCCGCCTCTCGACGGCCCGCCTGGGCGAGCAGGTCGCCCGCCGGCTTGTCGAGGAGTTCGGCGGCCGCTACAGCGACCACGAGACGCTCGTGACAGAGGACGGCGACGGCAACGAGGTGTACCGGGTCACCTACGCCGTCCACCTGCCGCCGTACCAGCCTGGCGAGGTGATCGACCCCGACGACGACGGCCCGGTGCTCGTCGAGAGCACCCACGGACAACTCCGCGGGACTCGCCTGCGGACCGGCGACTCCTACGAGGCGGCCTTCGAGGACGGCGACGCGCCGGAGGCCCGTCGGCTCGGGCGGTACGACGACGCCGAGGAGACGCCGCTGGTCGCCGTTGTCGACGACTACGCGGTGCAGGTGCTCGACCCCGAAACCTACGAGACAGAGACAATCGCACGCCCGTCGTATCTCGATCCAGACGCCGAGACCGTCCGCGTTTTGCGGGGTGACGACAGCCTGTACGTTCTGCCGGAGATGGCTCCGTCGAACGCCGCGTAG
PROTEIN sequence
Length: 373
MSRSGAFCPRCGDPIERPAESADRASEKDSSLCDSCYIDEYDLVDAPDRVEIRVCSRCGAVHRGNRWVDVGAEDYTDVAIEEVTEALGVHVAASGISWQVAPEQVDETTIRMHCQFSGVLRETPITEEVVVPAKIGHETCERCGRIAGGSYASVVQVRARDRDPDNTETGRAREVAHERVDALEAKGDREAFVSEITEVEGGLDIRLSTARLGEQVARRLVEEFGGRYSDHETLVTEDGDGNEVYRVTYAVHLPPYQPGEVIDPDDDGPVLVESTHGQLRGTRLRTGDSYEAAFEDGDAPEARRLGRYDDAEETPLVAVVDDYAVQVLDPETYETETIARPSYLDPDAETVRVLRGDDSLYVLPEMAPSNAA*