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QH_1_Halobacteriales_66_11

In projects: QH_1  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 51-100 of 229 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_1_scaffold_2315
Class: Halobacteria (57.14%)
7 8443 bp 70.39 11.38 93.49
qh_1_scaffold_5452
Order: Halobacteriales (60%)
5 4798 bp 66.97 11.38 57.59
qh_1_scaffold_4350
Species: Halosimplex carlsbadense (66.67%)
3 3063 bp 71.01 11.33 63.96
qh_1_scaffold_1814
Class: Halobacteria (70.59%)
17 14611 bp 66.96 11.31 79.89
qh_1_scaffold_15251
Species: halophilic archaeon J07HB67 (75%)
4 4620 bp 68.23 11.30 78.70
qh_1_scaffold_9052
Order: Halobacteriales (57.14%)
7 4460 bp 66.55 11.30 75.47
qh_1_scaffold_4878
Class: Halobacteria (83.33%)
12 6661 bp 65.01 11.29 73.46
qh_1_scaffold_4274
Class: Halobacteria (80%)
5 3099 bp 69.25 11.29 91.19
qh_1_scaffold_4247
Order: Halobacteriales (80%)
5 5539 bp 67.20 11.28 80.43
qh_1_scaffold_4069
Order: Haloferacales (60%)
5 5079 bp 65.03 11.28 86.53
qh_1_scaffold_4291
Class: Halobacteria (55.56%)
9 7767 bp 65.28 11.28 75.36
qh_1_scaffold_3582
Species: Halogranum salarium (50%)
2 3435 bp 66.38 11.27 91.27
qh_1_scaffold_3739
Class: Halobacteria (100%)
5 5739 bp 64.44 11.26 70.26
qh_1_scaffold_2268
Species: Halonotius sp. J07HN6 (50%)
2 4538 bp 62.03 11.26 95.53
qh_1_scaffold_7707
Order: Haloferacales (66.67%)
3 3367 bp 65.84 11.26 86.43
qh_1_scaffold_11430
Order: Halobacteriales (66.67%)
9 7461 bp 68.25 11.26 85.04
qh_1_scaffold_10710
Order: Halobacteriales (83.33%)
6 5103 bp 66.84 11.25 75.84
qh_1_scaffold_7945
Class: Halobacteria (50%)
6 4483 bp 64.38 11.22 51.93
qh_1_scaffold_11599 6 3087 bp 60.16 11.21 73.57
qh_1_scaffold_4219
Genus: Haloarcula (100%)
5 4031 bp 65.96 11.19 100.03
qh_1_scaffold_3091
Order: Halobacteriales (66.67%)
9 5348 bp 61.35 11.16 68.10
qh_1_scaffold_8334 5 4758 bp 70.60 11.16 53.40
qh_1_scaffold_4990
Species: halophilic archaeon J07HB67 (50%)
8 5862 bp 60.70 11.16 83.37
qh_1_scaffold_5015
Order: Halobacteriales (50%)
6 6635 bp 68.82 11.15 84.14
qh_1_scaffold_5600
Class: Halobacteria (100%)
5 4063 bp 68.15 11.15 70.22
qh_1_scaffold_3407
Order: Halobacteriales (60%)
10 7538 bp 68.15 11.14 89.23
qh_1_scaffold_6199
Order: Halobacteriales (75%)
12 8928 bp 66.69 11.13 73.79
qh_1_scaffold_6589
Species: halophilic archaeon J07HB67 (50%)
4 4162 bp 67.18 11.10 71.36
qh_1_scaffold_9860
Order: Haloferacales (60%)
5 3308 bp 68.44 11.09 65.21
qh_1_scaffold_9329
Species: halophilic archaeon J07HB67 (66.67%)
3 3120 bp 68.97 11.09 89.71
qh_1_scaffold_7577
Class: Halobacteria (50%)
6 4494 bp 67.82 11.08 72.03
qh_1_scaffold_1773
Class: Halobacteria (63.64%)
11 7744 bp 64.89 11.08 85.50
qh_1_scaffold_7920
Order: Halobacteriales (80%)
5 3857 bp 67.44 11.07 85.64
qh_1_scaffold_13167
Species: halophilic archaeon J07HB67 (80%)
5 3654 bp 67.21 11.06 81.12
qh_1_scaffold_3866
Order: Halobacteriales (55.56%)
9 7396 bp 66.91 11.06 78.53
qh_1_scaffold_16829
Order: Halobacteriales (66.67%)
6 4121 bp 68.14 11.04 77.82
qh_1_scaffold_5712
Order: Halobacteriales (71.43%)
7 6970 bp 69.01 11.02 85.61
qh_1_scaffold_6231
Species: Halonotius sp. J07HN4 (50%)
2 3136 bp 68.72 10.97 71.17
qh_1_scaffold_2917 7 3909 bp 68.18 10.95 81.66
qh_1_scaffold_1577
Species: Candidatus Halobonum tyrrellensis (50%)
4 6681 bp 69.56 10.94 94.70
qh_1_scaffold_20915
Species: Candidatus Halobonum tyrrellensis (50%)
4 3093 bp 69.32 10.93 83.03
qh_1_scaffold_10916
Order: Halobacteriales (80%)
5 3178 bp 66.24 10.89 80.52
qh_1_scaffold_4975 6 3684 bp 66.04 10.88 58.31
qh_1_scaffold_6072
Species: halophilic archaeon J07HB67 (75%)
4 4697 bp 68.92 10.86 86.54
qh_1_scaffold_1571
Order: Halobacteriales (50%)
6 5749 bp 67.35 10.85 87.56
qh_1_scaffold_1664
Class: Halobacteria (60%)
5 5482 bp 68.37 10.84 93.41
qh_1_scaffold_3015
Order: Halobacteriales (80%)
5 4965 bp 69.55 10.84 88.82
qh_1_scaffold_6143
Order: Halobacteriales (57.14%)
7 5847 bp 67.35 10.81 75.22
qh_1_scaffold_6445 7 4610 bp 61.30 10.78 62.93
qh_1_scaffold_3391
Species: Candidatus Halobonum tyrrellensis (66.67%)
3 5266 bp 67.26 10.77 86.37
Displaying items 51-100 of 229 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.