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qh_6_scaffold_3814_2

Organism: QH_6_Halobacteriales_67_10

partial RP 11 / 55 BSCG 6 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(489..1580)

Top 3 Functional Annotations

Value Algorithm Source
NMD protein affecting ribosome stability and mRNA decay n=1 Tax=halophilic archaeon J07HX64 PF34_9EURY">RepID=U1PF34_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 366.0
  • Bit_score: 473
  • Evalue 1.40e-130
NMD protein affecting ribosome stability and mRNA decay {ECO:0000313|EMBL:ERH08694.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 366.0
  • Bit_score: 473
  • Evalue 2.00e-130
nonsense mediated mRNA decay-like protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 372.0
  • Bit_score: 457
  • Evalue 3.90e-126

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Taxonomy

halophilic archaeon J07HX64 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1092
ATGAGCCGATCGGGAGCGTTCTGTCCACGGTGTGGGGATCCGGTCGCGTCCGACCGGCCGGCCGGGCGGACATCTCGGGACGCCGCACTCTGTGACGCCTGTTATCTCGCCGAGTACGACCTCGTCGACGCGCCCGATCGGATCGAGCTGACTGTCTGTGCCCGGTGTGGCGCCGTCGAGCGCGGCGCGGGCTGGATCGACGTCGGTGCCGACGATTACGTCGACATCGCCGTCGACGCGGTCCAAGAACGGCTGGGCGTTCACGCCGACGCCGAGGAGGTCAGCTGGGAGGTCGCCCCAGAGCGGGTCGACGAGACGACGATCCGGATCCACGCTGGCGTCGCGGGGCGGCTCCGCGGGCGTCCGGTGACCGAGGAGCGGACGATCGCGGTCAAGATAGGACGAGGAACGTGCACCAGATGCGGGCGCATCGCCGGGGGCTCGTACGCCAGCACCATCCAGCTGCGGGCTCACGATCGGGAGCCTGACGACGACGAGCGGGCCCGAGCGGCAGAGATCGCGACCGACCTGGTCGAGGAACTCGAGGCCGACGGCGACCGCGAGGCGTTCGTGACCGGCATCGAAGACGTGCCGGGAGGCCGAGACGTCCGACTGTCGACGACGCGGCTCGGCGACCGGGTCGCCCGCCGGATCGTCGCGGAGCTGGGCGGCGACTACACCACGAGCGAGACCCTCGTGACCGAAGACGAGGACGGCAACGAGCTGTACCGGGTGACCTACGCGATCCGGCTACCGGCCTACCGGCCCGGAGCAGTCGTCGATCCGGGCGACGGCGATCCGATACTCGTCCGGAGCGCCGGCGACCGGCTCACGGGGACCCGACTGACCACCGGCGCGGATTACGACGGGCCAGTCGAGGACGCCACGCGGCTGGCGGACCGCGAGGATGGCGTCGAGACGACCCTGGTCGCCGTCCCGGACGCACACGCGGCCCAGGTGCTCGATCCGGAGAGCTACGAGACTGTGAGTGTCCCACGTCCCTCGTATCTCGATCCCGACGCCGACGCCGTTCGAGTGGTCCGGGCCGCGGGCCAACTGTACGTGCTTCCGCCCGAGCCCGACGGGTCGTAG
PROTEIN sequence
Length: 364
MSRSGAFCPRCGDPVASDRPAGRTSRDAALCDACYLAEYDLVDAPDRIELTVCARCGAVERGAGWIDVGADDYVDIAVDAVQERLGVHADAEEVSWEVAPERVDETTIRIHAGVAGRLRGRPVTEERTIAVKIGRGTCTRCGRIAGGSYASTIQLRAHDREPDDDERARAAEIATDLVEELEADGDREAFVTGIEDVPGGRDVRLSTTRLGDRVARRIVAELGGDYTTSETLVTEDEDGNELYRVTYAIRLPAYRPGAVVDPGDGDPILVRSAGDRLTGTRLTTGADYDGPVEDATRLADREDGVETTLVAVPDAHAAQVLDPESYETVSVPRPSYLDPDADAVRVVRAAGQLYVLPPEPDGS*