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qs_1_scaffold_120_7

Organism: QS_1_Euk_56_21

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Location: 5347..6033

Top 3 Functional Annotations

Value Algorithm Source
C. briggsae CBR-RSP-4 protein n=1 Tax=Caenorhabditis briggsae RepID=UPI0000122657 similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 203.0
  • Bit_score: 117
  • Evalue 2.10e-23
Cbr-rsp-4; C. briggsae CBR-RSP-4 protein; K12891 splicing factor, arginine/serine-rich 2 similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 203.0
  • Bit_score: 117
  • Evalue 6.70e-24
Probable splicing factor, arginine/serine-rich 4; CeSC35; RNA-binding protein srp-2; TaxID=6239 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 203.0
  • Bit_score: 111
  • Evalue 1.30e-21

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Taxonomy

Caenorhabditis elegans → Caenorhabditis → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 687
ATGGGCAGTGGTCCGCCCGATATCAGCGGGCTTGTGTCTCTAAAAGTTGACGGCCTTGGGGAAGGCGTGGGCCGCGAGGCGCTGCGGAGTGCTGTGCCCGACTCGCTGCGCTCCAAAGTTGGTGACGTGCACATCCCCCGCAGCAAACGCGGTTTTGGCTTCATCCGCTTCCACTCCCGCTCCGCCGCCGAGGACGCCCGCGCGAGCATGCAGGGCGCCGTCCTCCACGGCCAAGAGCTCGACGTCAACTTTGCTGAGAAGCCTCGCCCCGACGACCAGCTCCCCGGCCTCCGCGGTGACAATGACCACCCCGACGGAGACAAGCCCCGTCGCCGCAGCCCTCCAGCCCCTCGCCAACGTCGAGACTTAAACGAAAAATCCGCTCCTAATCGCGCCCCATCTCCTCCTCCCGCTCGCTCCTCCCGCTCCCCACGCCGCGATGAGCCTGAGCGCTCCTCGCGCCGCTCACGCTCGCGCAGATCCATGCCGCCCCCTCGCGACAAGAGCGACGATTATCAGAGCGCTCCCGACCGTGACAACCGCGAGCGCGAGCGCGAGCGTGAGCGCTCCCGCGGCCGTTCCCGCTCTCGCCCTGCGGAAGAACGCCGCGGTCGCTCGAAGCCACGTGACGATGATGGGCACACCCGCCGCCGCAGCCGCCGCTCGCCGCCCACCCGCGACCGCTGA
PROTEIN sequence
Length: 229
MGSGPPDISGLVSLKVDGLGEGVGREALRSAVPDSLRSKVGDVHIPRSKRGFGFIRFHSRSAAEDARASMQGAVLHGQELDVNFAEKPRPDDQLPGLRGDNDHPDGDKPRRRSPPAPRQRRDLNEKSAPNRAPSPPPARSSRSPRRDEPERSSRRSRSRRSMPPPRDKSDDYQSAPDRDNRERERERERSRGRSRSRPAEERRGRSKPRDDDGHTRRRSRRSPPTRDR*