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qs_1_scaffold_2030_14

Organism: QS_1_Euk_56_21

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Location: comp(6955..8553)

Top 3 Functional Annotations

Value Algorithm Source
Ubiquitin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L8S8_ARALL similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 557.0
  • Bit_score: 325
  • Evalue 9.20e-86
ubiquitin family protein; K04523 ubiquilin similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 557.0
  • Bit_score: 325
  • Evalue 2.90e-86
Ubiquitin family protein {ECO:0000313|EMBL:EFH62362.1}; TaxID=81972 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 557.0
  • Bit_score: 325
  • Evalue 1.30e-85

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Taxonomy

Arabidopsis lyrata → Arabidopsis → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1599
ATGCGGCTCAAGTGCAAGCCGACGAGCGGGGAGAAGTTTCAGGTGGAGGCAGAGGAGCAGCAGAGCGTAGAGAGCTTGAAGCAACAGCTGGCGGAGCCCAGTGGCATCGCGGCGGAGCAGCAGCGCGTCATCTGGCGTGGGCAGGTGTTGCAGGACTCGCGCACGCTCGCCTCATACGGCGTTCAGCCCGACCACACCCTCCACCTTGTCGCCAGCGCGCCACCCTCGCAGCGCGTTGGCACCGCCCCCAGCTCCGCTCCCTCCCAGCCCGAGCGCCAGCGCTCGCAGCCGTCACACCCTTCGCAACCCGGCGCAGGCAACGACGCGGTGAGCCAACTGCTCGGCGGAGGCAGCGAAAGTGCAATGCTGCAGGGCATGCTCCGCTCCGGCGGCGAGGATGGAAGCATGGAGCAGCTCCAGCAGCAGCTTCAGTCAGACCCCGAGCAGATGCAGCAAATGCTCAACTCGCCTATGATGCAGACGCTCATGCAGCAGATGGAGAACAACCCCGAGATGCTCCGCCACATGGTTGAGCAGAACCCGCAGGTGTCCGAGCAGATGGCGCAGCAGAACCCGCAGATGTACCACATGATGCGCGACCCTGAGATGCTGCGCCAGATGCTGCGGATGATGCGCAACCCTCAGCTTATGCAGGAGGAGATGCGGTCGGCCGACCGCGCGATGAGCCACCTCGAGACCAACCCGGAGGGCTACCAGATGATGCGCCGCATGTGGGAGGACATGAACAGCACGATGCAGGACAGCATGGACTCAGGTGAGAGTGATGGCGGCACTTCGCGGCAGAGCGCGAGAGCGCAGCAAGCGCAGCAAGAGGGCGGCACTGGGCAAGGCGACGGCTCCCCAAATTCGCAGCCGTTACCAAACCCTTGGAGTGCTGGAGGGCAGCAGCGGGAACAGCCCGCCGGAGCCGCTGGTCTGCGGTCGGCGCCAGATGTTGGTTCATTGCTATCTGGCATGCAGGGCCAGCAAAGCCAGCTAGGAGGCGGCGGCTCTCAGAGCACCGCAGACCCTCTCAGATCCGGAGCGGGCGGGAACTCCCTTGAAACAGCGCAGCAGATGATGAATGATCCGAACATGAGGCAAATGTTCGATCAGATCGTCAGCAATCCTCAGTTGATGGAAAGCGTGGTGCAGGCAAACCCGCAGCTTCAGCAGATGATGAACAGCAACCCCGTGTTAGCGCAAGTTCTTCGAGACCCGAGCGTGATGCGGCAGGCGATGGACCCACAGAACCTGCAACAGCTGTCGCAAATGCAAGAAGAGATGCAGCAGCTCTCCGGGCAGTCAGGAAACCAGCCGGACATGAACCAGCTGATGAGCTTGCTCGGCGGTGGAGCGCAGCAGCCGCACGGAGGAGCAGGAGCTGCACAGCCGGACATAAGCCAGCTGATGAACCTGCTTGGTGGAGGAGGCGGCGCTCAAACGCAGGAGCAGGGCGCAGCGCAGGCGCAGCAGCCACCGCAGGAGCGCTTCGCTACGCAGCTGCAGCAGCTCCGGGAGATGGGCTTCTTAAGCGAGGAGGAGAACGTCAGAGCGCTCGAAGTGCGTGCCTTTCCTCCTCACCCCACGCTTACATGA
PROTEIN sequence
Length: 533
MRLKCKPTSGEKFQVEAEEQQSVESLKQQLAEPSGIAAEQQRVIWRGQVLQDSRTLASYGVQPDHTLHLVASAPPSQRVGTAPSSAPSQPERQRSQPSHPSQPGAGNDAVSQLLGGGSESAMLQGMLRSGGEDGSMEQLQQQLQSDPEQMQQMLNSPMMQTLMQQMENNPEMLRHMVEQNPQVSEQMAQQNPQMYHMMRDPEMLRQMLRMMRNPQLMQEEMRSADRAMSHLETNPEGYQMMRRMWEDMNSTMQDSMDSGESDGGTSRQSARAQQAQQEGGTGQGDGSPNSQPLPNPWSAGGQQREQPAGAAGLRSAPDVGSLLSGMQGQQSQLGGGGSQSTADPLRSGAGGNSLETAQQMMNDPNMRQMFDQIVSNPQLMESVVQANPQLQQMMNSNPVLAQVLRDPSVMRQAMDPQNLQQLSQMQEEMQQLSGQSGNQPDMNQLMSLLGGGAQQPHGGAGAAQPDISQLMNLLGGGGGAQTQEQGAAQAQQPPQERFATQLQQLREMGFLSEEENVRALEVRAFPPHPTLT*