ggKbase home page

qs_1_scaffold_268_18

Organism: QS_1_Euk_56_21

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Location: 13844..16513

Top 3 Functional Annotations

Value Algorithm Source
PAB-dependent poly(A)-specific ribonuclease subunit PAN2 {ECO:0000256|HAMAP-Rule:MF_03182}; EC=3.1.13.4 {ECO:0000256|HAMAP-Rule:MF_03182};; PAB1P-dependent poly(A)-nuclease {ECO:0000256|HAMAP-Rule:MF_ similarity UNIPROT
DB: UniProtKB
  • Identity: 32.6
  • Coverage: 901.0
  • Bit_score: 401
  • Evalue 3.10e-108
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9TGP1_RHIID similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 900.0
  • Bit_score: 401
  • Evalue 2.90e-108
PAB-dependent poly(A)-specific ribonuclease subunit 2-like similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 902.0
  • Bit_score: 390
  • Evalue 1.60e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizophagus irregularis → Rhizophagus → Glomerales → Glomeromycetes → Glomeromycota → Fungi

Sequences

DNA sequence
Length: 2670
ATGCCCTCCTCGCTCTTGCTCGCCTCAGGCTCCACTGGTGCCATCATGCTCGCCGACGCTCAGCTCGGCGCGTCCCAGTGGGCCAGCCAGGAGGACTCGGCCAGTGCTGGCCTGCTGTCCCTCACGCTAAGCCCCACCGGTACTGTGTTCGCTCTTGGCGATGGCGGCGGCCTGCTGCACTTGTATGCCAGCTCCACCAGGTCGAGTGCACAGTCGAGCCTCAGCGGAATTGAAGCTGAGGATCCCCCGCTTCGTCCGCCTGGATCACAACCACAGGACGAGCACGCGCCTGTTCCTGAGGTGTCACCGCCTGAGCTTCTGCAGGCGGACTCGCTTCTGTCCGACGTCAAGCCGTCGAACCGCGTGAGCGTCGGCTTAGGGCCACGACAGATGCCCAAAGCAATCTCCGAAGCGCTTGCAAACGCCGGCTTCATGTCGTTTGTGCGCAATCCCTTATATAATCGGTCGAACCCACAGGGCGAGGCGAAGCGCAAAGTGTACGCTGCAATGAACCGTCGAGCCGGTTCACAAAGAGCGCGTCACGGCAGTGCGCGCAAGGCTGTTCCCGACGCGTACCTGTATAGCGAAGTGGGAGAGTCTACACAGGCTTTCACACGCTTAAACCATACAGCACTCGCAGGGCTGGAAAATGGCCTGCCAAATTGCTATGCCAATGCAGTGTTGCAAGTAATGCACTTCAACTTTGAACTTCGCAACGGTGCGCTCTCACACCTGTGCGAACGCGACGCGTGCATCACGTGCGAGTTAAATTTTTTAATACACATGCTCCGATCAACTCCCCGCGGAGGCTCCTGTCAGCCACAAAATCTGCTTCGCTCGCTCCGCCAAGTCCAAGAAGCTTCTGCACTTGGTCTGCTTGAGTGCAACAATCAGCTAGAAGCGCAGATCGATGTGCCGCTGGCTCGTAGAGTACAGGGCTTCCAGCGCTTCCTGCTTGAGCAGTTGCACAAGGAGCAGATACCGTCGCCGCTGCATGCAGACAGGACGATACCAGAGGAGGCATTTGGGACTACAGCATGGCAGGTGACTGAATGCACAACATGCAGCCACTCCACCGAGCGCACACAAACGACATTCCAGGTCGAGCTTGAGTACTCAGGTGCGCCAGAGCGGAAGGCGCAAAGCGGACAAGAAGAAGTTCTGTGGCCAACTTTTGCATCATTGCTGCAGCAAAGCATTGCGCACGAGACTCAGCTGCGCGCCTGGTGCCACGCCGAGCGTAAGTACACCCGGATGAAACAGTTACGCATCCTGACTTCACCGCCGAAGACTCTTGTGGTGAGCTGTGGCGTGCCGACAACGCCTGACTTAGGGTACTGGGGAGTGTATCCAAGCGCAAAGCCTGAGGATGGCCGCAAGTACTTCGGCAACGAATTTCTGCCTTTTTGCATTCGCGTCCTGCTTGACAAAGAGCATCGACGATCGCGCGTGGAGCAGGCGGACTCGCCTGACGAGCTTTCCGCCTGGAATGATGAGCGAGATAAAAGCAGCAGCAACACTGCAACGTACGTTCTGTGGGCGCTCGTGAGTGTTGTGCGCGATCGGATACCAGAGCTGGATCGCAATGAGGCGGTTGGCTCACCCTCTGAGCCAGACTCCCGGCATGGTGAGATGCGTCACGTTGTTGCACATGTGAATGTGGATGAGGAATATCTGCAGGGGCAACGGGCGCGTCAAGATCGATCAACAAACCAAGATGAGGATATTGATAAAGATGAGCCGGGCTGGTATGTGCTTAACGATGCGACGATTGAGCCGACATCAGATGACGAGGTCAGGCGGATGTATGGCATAAATAAGAATCCAGTGCTTGCGTATTACAGGCGCATTGACGAAGAAGCTCATGCAACCCATCACGATAGGGCGGACGCACGCGTACTTGATCAGTCACAATTCTTCAGACTCTCAACACCGAAAGTTCAATCGATGAAGCTGCAACCGCTTCAGCCGAATGAGCTTCGAAGCATTCGGCTATTAGGCCTTGATGCTGAGTTCGTTGCACTGACGCCACCGGAAATTGACGTGTCGGAAGACGGCTTCGAGCGCACCATCCGTCCGTCAAGGCTTGGTCTCGGCAGGGTGAGCGTGGTACGTGGCGAGGGGAGCTCTATGGGACTTGCTTGCATTGATGAGTACGTCAACGCCGTTGAGCCTGTGTACGATCACCTCACCAAGTTTTCAGGGCTTGTACGAGGCGATCTAGAGCCGCTGAACACTCGGAAGAATTTGGTGACACTCAAGGAGGCGTACCTAAAGCTGCGATTCCTGGTGGATTCCGGCTTCGTCTTCATAGGCCACGGTCTCTCGAAAGACTTCCGAATGATCAACATCAGCGTGCCGGATGAGCAGGTGTTGGACACGGTCGAGCTTTTCCGGCTGCCAAGTAGCAGGCGGCTGAGCCTGCGCTTCTTAGCCGCATTCATTCTTGGCGTTGATGTGCAGGCAAAGACACACGACAGTATTGAGGATGCACATGTAGCTGTACAGCTGTACAAGGTCTACAACTCATTACAGAGGAAGGGCCGGCTTGAGAAAACTCTACGTGAAATGTACCGAGCCGGGAAGACGAGAGGCTGGGCCATCACACCTGACCTCCTACAGCTTGGGCGGATGCACCGAAGTGAGCACAGCACCGAGATAAGCGCTTAA
PROTEIN sequence
Length: 890
MPSSLLLASGSTGAIMLADAQLGASQWASQEDSASAGLLSLTLSPTGTVFALGDGGGLLHLYASSTRSSAQSSLSGIEAEDPPLRPPGSQPQDEHAPVPEVSPPELLQADSLLSDVKPSNRVSVGLGPRQMPKAISEALANAGFMSFVRNPLYNRSNPQGEAKRKVYAAMNRRAGSQRARHGSARKAVPDAYLYSEVGESTQAFTRLNHTALAGLENGLPNCYANAVLQVMHFNFELRNGALSHLCERDACITCELNFLIHMLRSTPRGGSCQPQNLLRSLRQVQEASALGLLECNNQLEAQIDVPLARRVQGFQRFLLEQLHKEQIPSPLHADRTIPEEAFGTTAWQVTECTTCSHSTERTQTTFQVELEYSGAPERKAQSGQEEVLWPTFASLLQQSIAHETQLRAWCHAERKYTRMKQLRILTSPPKTLVVSCGVPTTPDLGYWGVYPSAKPEDGRKYFGNEFLPFCIRVLLDKEHRRSRVEQADSPDELSAWNDERDKSSSNTATYVLWALVSVVRDRIPELDRNEAVGSPSEPDSRHGEMRHVVAHVNVDEEYLQGQRARQDRSTNQDEDIDKDEPGWYVLNDATIEPTSDDEVRRMYGINKNPVLAYYRRIDEEAHATHHDRADARVLDQSQFFRLSTPKVQSMKLQPLQPNELRSIRLLGLDAEFVALTPPEIDVSEDGFERTIRPSRLGLGRVSVVRGEGSSMGLACIDEYVNAVEPVYDHLTKFSGLVRGDLEPLNTRKNLVTLKEAYLKLRFLVDSGFVFIGHGLSKDFRMINISVPDEQVLDTVELFRLPSSRRLSLRFLAAFILGVDVQAKTHDSIEDAHVAVQLYKVYNSLQRKGRLEKTLREMYRAGKTRGWAITPDLLQLGRMHRSEHSTEISA*