ggKbase home page

qs_1_scaffold_3119_7

Organism: QS_1_Euk_56_21

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Location: comp(8636..9004)

Top 3 Functional Annotations

Value Algorithm Source
40S ribosomal protein S12 n=2 Tax=Oryza RepID=I1Q973_ORYGL similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 121.0
  • Bit_score: 161
  • Evalue 4.10e-37
40S ribosomal protein S12 {ECO:0000256|RuleBase:RU000670}; TaxID=40149 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poa similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 121.0
  • Bit_score: 161
  • Evalue 5.70e-37
LSU ribosomal protein L7Ae similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 108.0
  • Bit_score: 61
  • Evalue 2.10e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oryza meridionalis → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 369
ATGGACATGATGACAGCGCTGCAGCAGATCCTGAAAGACTCACTGGCGAGCGACGGCTTGGCACGGGGACTGAAGGAGGTGACGCAGGCAATTGAGAAGAGGAACGCGCAGCTCTGCGTGCTTGCTCAGGACTGCGACCAGCCCGACTACATCAAGCTCATCAAGGCGCTTTGCAATGAGGCGAATGTGCAGCTCATCAGCGTGCCGAAGGCGAAACAGCTTGGTGAGTGGGTTGGTCTCTGCAAGCTGGACGAGGAGGGCAACGCCCGCAAGGTCGTCGCTTGCTCATCCGCCGTTGTGAAGGACCTTGGCGAGGGTGACTCCGAGGCGCTTAGCGTTATCCGCAACAGCATCTCCGCCAACAGCTGA
PROTEIN sequence
Length: 123
MDMMTALQQILKDSLASDGLARGLKEVTQAIEKRNAQLCVLAQDCDQPDYIKLIKALCNEANVQLISVPKAKQLGEWVGLCKLDEEGNARKVVACSSAVVKDLGEGDSEALSVIRNSISANS*