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sw_11_scaffold_1732_14

Organism: SW_11_Halothece_sp_44_9

near complete RP 49 / 55 MC: 3 BSCG 47 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 11483..12613

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YEA1_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 376.0
  • Bit_score: 616
  • Evalue 1.80e-173
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 376.0
  • Bit_score: 616
  • Evalue 5.20e-174
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. ( similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 376.0
  • Bit_score: 616
  • Evalue 2.60e-173

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Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACAGATATTAAACTAATAACGGGTCAAGATACCAAGTCTGAGGAGTCTCTAACCCCGACTGAATCTTTAGAAACTTTGCTTTCTCCTCTCGAAGAAACAGAATCCTCGGATGTCTCATTGGTTGATGTTGATTTTTCTCACCATAGCAAGAGTGAGTTTAATCAAGTTCAGGGGCAAAGCAATAATGAAGATACTGTTAGAGCCTTCTTTAAGGAAATGGCTCGTTATCCGCTGTTAAAACCGGAAGAGGAAGTAGCGTTAGCGCAACAAGTTAAATTTTTAGCAGACATTGAAGATAAACGCCAAGAGTTAGCCCAAGTTTCAGGTTACTCCCCGAAAAAAGAAGAATTAGCAACGGCGTTTTCTCTAACTGTTAAAGAATTGGATCGCAAACTGTATCAAGGACGCGTCGCCAAACGGCGCATGATTCGTTCGAATTTAAGGTTAGTGGTGTCTATTGCCAAACGATATCTCAATCGCGGTGTTCCCTTTTTAGATTTAATTCAAGAAGGAGCGATTGGTTTAAATCGTGCAACTGAAAAATTTGATCCCGATAAAGGATACAAGTTCTCTACCTATGCTTATTGGTGGATTCGTCAAGCAATTACTCGCACGATTGCCAATGATGCCCGCACGATTCGCCTTCCCATTCATATTGTCGAAAAACTGAATAAACTGAAAAAAGCGCAACGCGACCTGAAACAAAAATTAAAGCGCAATCCCACTGAGCAAGAGTTAGCCCAGGAATTAGAAGTTTCCCTGTCGCAATTGCATCAACTGTTGAAACTTCGCCGCCAATCTCTTTCTTTAAACCATCGGGTGGGCAAGGGAGAAGATACTGAATTGTTGGAATTGCTGGAAGACCATGAAATGAGACTTCCTGAAGATCAGATGAATGAAGTGATGATGAATCAGGAAATCTCGGAGGTTTTAAGCGATGTTCTCACACAACGGGAAAAAGATGTTATTTCGATGCGCTATGGCTTAAATGCCAGTCAACCCTATACGTTAGAGGAAGTGGGGTATATGTTTGATCTGTCCCGAGAACGGGTCCGTCAAATTCAAAGCAAGGCGATGCGCAAATTGCGTCGTCCCCAAGTGGCGCGTCGGTTGAAAGGATGGTTATAA
PROTEIN sequence
Length: 377
MTDIKLITGQDTKSEESLTPTESLETLLSPLEETESSDVSLVDVDFSHHSKSEFNQVQGQSNNEDTVRAFFKEMARYPLLKPEEEVALAQQVKFLADIEDKRQELAQVSGYSPKKEELATAFSLTVKELDRKLYQGRVAKRRMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRATEKFDPDKGYKFSTYAYWWIRQAITRTIANDARTIRLPIHIVEKLNKLKKAQRDLKQKLKRNPTEQELAQELEVSLSQLHQLLKLRRQSLSLNHRVGKGEDTELLELLEDHEMRLPEDQMNEVMMNQEISEVLSDVLTQREKDVISMRYGLNASQPYTLEEVGYMFDLSRERVRQIQSKAMRKLRRPQVARRLKGWL*