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sw_11_scaffold_10155_2

Organism: SW_11_Bacteroidetes_45_7

near complete RP 48 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: 544..1608

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein RffA n=2 Tax=Clostridium botulinum B RepID=B2TQH2_CLOBB similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 375.0
  • Bit_score: 294
  • Evalue 2.00e-76
TDP-4-oxo-6-deoxy-D-glucose transaminase similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 375.0
  • Bit_score: 294
  • Evalue 5.60e-77
Lipopolysaccharide biosynthesis protein RffA {ECO:0000313|EMBL:ACD24919.1}; Putative DegT/DnrJ/EryC1 protein involved in cell envelope, possible dTDP 4-oxo-6-deoxy-D-glucose transaminase {ECO:0000313| similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 375.0
  • Bit_score: 294
  • Evalue 2.80e-76

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1065
ATGAGAAGCAAGCAACAACCTAATACCAGTCATATTCCTTTCAACCGCCCTACCATCACAGGTTATGAACAACAAATGATGAATGACCTGTATCAAAATCCCGGCTATTTCAGAGATCGCCATTTCCACAAATTGTGTGGTGAACTGCTCAAGACGTGGTACAGGAATAGCAACATTTTTTTAACAACCAGTTGCACGCACGCCTTAGAACTTGCCGTAGAGCTTCTGCAGCTTCAAAAGGATGATGAAGTCATTCTCCCATCCTTCACGTATGTATCAACAGCCAATGCTGTTGTGAATTGCGGTGCCCGTCCGGTTTTTGTCGATATAGATCCTGCCTCTTTTAACATGGACCTTTCTTTACTGCAAGACGCCATCACTGACCGAACAAAAGCGATCATTCCTGTCCATTATAGTGGAATCAGTTGCGATATTGACAGGATGCGGAAGATAATAAGAAATGATATCCCCATTATTGAAGATGCCGCTCATAGTTTCCTGGCGGAGCATCATGATCAAAAGCTCGGCACAATGGGTGAATTAGGGTGTATTAGCTTCGACTATACAAAAAATGTCTCATGTGGTCATGGCGGTATGCTCCTTGTGAACGATAGCTCCTGCCTTGCTCAAGCCGAAATCGCATATGAAATTGGCACCGATAAGGCGAAGTTTCTCAGAGGGGAAAAGGACTTTTTTGAATGGGCAGGAGCAGGAAGTAAATACGCCCTTTCCGAGTTGAATGCCGCTCATCTATACGCTCAATTACAATGGGCGCAGGATATAACCCAAAAGCGCTTAGAAGCATGGCATTATTACTTGAACAACCTCTCACCCATTGCCGAGGAGCACAACCTTCAACTGCAAAACATCGAAGCCACATTTCATTATATCCCTCTCCATAACTCCACTTATGGGCAGCAAACAGGTCGTTTCATCCATCATCGCGGGCAGGATAACACGCAGAATATTAGCCAACGAATGATACGGTTACCCCTTTTCCACGGCATCACCAGGGAGGAGCAGGACAGGGTTATCGAAAGCATCAAGAGCTTCTATACCAAATAA
PROTEIN sequence
Length: 355
MRSKQQPNTSHIPFNRPTITGYEQQMMNDLYQNPGYFRDRHFHKLCGELLKTWYRNSNIFLTTSCTHALELAVELLQLQKDDEVILPSFTYVSTANAVVNCGARPVFVDIDPASFNMDLSLLQDAITDRTKAIIPVHYSGISCDIDRMRKIIRNDIPIIEDAAHSFLAEHHDQKLGTMGELGCISFDYTKNVSCGHGGMLLVNDSSCLAQAEIAYEIGTDKAKFLRGEKDFFEWAGAGSKYALSELNAAHLYAQLQWAQDITQKRLEAWHYYLNNLSPIAEEHNLQLQNIEATFHYIPLHNSTYGQQTGRFIHHRGQDNTQNISQRMIRLPLFHGITREEQDRVIESIKSFYTK*