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sw_4_scaffold_167_6

Organism: SW_4_Oscillatoriophycideae_48_29

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38
Location: comp(8638..9771)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WH45_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 377.0
  • Bit_score: 601
  • Evalue 8.00e-169
RNA polymerase sigma factor, cyanobacterial RpoD-like family similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 377.0
  • Bit_score: 601
  • Evalue 2.30e-169
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7 similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 377.0
  • Bit_score: 601
  • Evalue 1.10e-168

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Taxonomy

Microcoleus sp. PCC 7113 → Microcoleus → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGACGCAAACCAACGATGTACTCGTAACAATCAACCAGCCTCCGACTGAGTTGGAATTCTTAATCGACCAAGAAGCAAATGAAGCAGTTGGAGAAGAACCAGTTGAGGCTGTGGATAACGAGACTGAGAATGGCAAAGCTCAGAAGCCTCCTGTTTCTAGCAGTAGCGAGCAGACGCAAAAGAAATCTTACACCGAAGACTCCATTCGCCTTTACTTGCAAGAAATTGGTCGCGTCCGCCTCCTCAGAGCGGATGAGGAAATCGAACTAGCTCGCAAAATCTCGGAGCTACTGGAGTTGGAGCGTGTACGCGATCGCCTGATTGACCGCTTAGAGCGCGAACCCAATCACCACGAATGGGCGGAAGAGGTCAACATGGATCTGCGCGAGTTTCGCCGTTGTTTGCGCTATGGGCAGCGGGCAAAAGAGAAGATGGTACAGTCTAACTTGCGTCTAGTTGTCTCCATTGCGAAAAAATACATGAACCGGGGATTATCCTTTCAAGACCTCATTCAGGAAGGTTCTTTGGGATTGATTCGGGCAGCCGAGAAGTTCGACCACGAGAAAGGGTATAAGTTCTCTACCTACGCGACTTGGTGGATTCGCCAAGCAATTACGCGGGCGATTGCAGATCAATCGCGCACCATTCGCCTACCGGTTCACCTCTATGAAACCATATCTCGCATTAAAAAGACTACTAAGCTTCTTTCCCAAGAGTTAGGGCGCAAGCCGACCGAAGAAGAAATCGCCACTAGCATGGAAATGACCATTGAGAAGCTGCGGTTTATTGCTAAATCGGCTCAGTTGCCCATATCCCTAGAAACCCCCATCGGCAAAGAGGAAGATTCTCGGCTCGGAGATTTCATTGAAGCTGATGGCGAAACGCCAGAAGACGATGTCTCTAAAAATCTTCTCCGGGAAGACCTCGAAGATGTACTTGATACCCTAAGCCCCCGCGAACGGGATGTTTTACGGTTGCGTTACGGTCTAGAAGATGGACGGATGAAAACCCTCGAAGAAATTGGTCACACCTTCAACGTTACCCGCGAACGGATTCGGCAAATTGAAGCCAAAGCGCTTCGCAAACTACGCCATCCCAATCGCAACAGCATTCTTAAAGAGTATATCCGCTAG
PROTEIN sequence
Length: 378
MTQTNDVLVTINQPPTELEFLIDQEANEAVGEEPVEAVDNETENGKAQKPPVSSSSEQTQKKSYTEDSIRLYLQEIGRVRLLRADEEIELARKISELLELERVRDRLIDRLEREPNHHEWAEEVNMDLREFRRCLRYGQRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPTEEEIATSMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDDVSKNLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGHTFNVTRERIRQIEAKALRKLRHPNRNSILKEYIR*