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sw_7_scaffold_1439_9

Organism: SW_7_Nanohaloarchaea_46_7

near complete RP 31 / 55 MC: 9 BSCG 18 / 51 MC: 3 ASCG 31 / 38 MC: 2
Location: comp(5454..5789)

Top 3 Functional Annotations

Value Algorithm Source
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor id=18316192 bin=Nanosalinarum tax=Nanosalinarum similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 112.0
  • Bit_score: 174
  • Evalue 5.50e-41
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosali similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 117.0
  • Bit_score: 166
  • Evalue 2.70e-38
Transcription elongation factor S (TFS_arch) similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 115.0
  • Bit_score: 99
  • Evalue 6.30e-19

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Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 336
ATGGAGTTCTGTGATGATTGTGGAGGAATGCTTGTCTCGGAAAAGAAAGACGGAGAGACAGTTATGCAGTGCAGAAACTGTGGAAAAGTACAGGATGTAGACTCTGAAGATATGAAAGTTACAGAGGAAAAAGAAGAGGATCCGAAAGACCGTCTTAACGTCAACGAAGAAGGCGCAGAAGATACTGCAAGGCCTACCACACAGGAAGAATGCCATAAATGCGGTGAAGAAACCGAACACGAATGGTGGATGAAACAGACCAGGGCCTCAGACGAGCCTGCTACACGTTTCTACAAATGCACCGAATGCGGTAACGTCTACAAAGAATACGACTAA
PROTEIN sequence
Length: 112
MEFCDDCGGMLVSEKKDGETVMQCRNCGKVQDVDSEDMKVTEEKEEDPKDRLNVNEEGAEDTARPTTQEECHKCGEETEHEWWMKQTRASDEPATRFYKCTECGNVYKEYD*