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qh_2_scaffold_3673_2

Organism: QH_2_Salinibacter_ruber_63_10

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 1104..4313

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=761659 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 999.99
  • Bit_score: 1783
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4M8_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 999.99
  • Bit_score: 1783
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 999.99
  • Bit_score: 1783
  • Evalue 0.0

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3210
ATGCCCCCACGCTCCCTCTCCCCAGAAGCGTCCGGCAGGATCGGCACTCGGGCACGAACCGACCTCACACACCAGACCGAAAACCCGCCTGTGTCCCTCTCCTCCATCGCCCAGCGCATCGAAACGACCGCGGCCGTCTCGCGCCTCCGCTCGTGGGTCGACGACGCCCAGGCCGTCACGGAGGCCCCGGCGCTTCACGTGACGGGCGCCGCCGGCTCCGTTCCGGCCTTCCTCCTCTACCACGTCCACACGAGCCCCGGCGCCCCCCTCTGCATCCTGGTGCCCGACGAGGACGCGGCCGCCTACCTCCAGAGCGACCTGGAGCAGTTGGTAGACGACCCCGAGGAGCAGGTCCTCCGCGTGCCGGCCACCCAGCGCCCCCCCTACGACCGGGACCAGATCACCGACTCGACGCCCCTCATCGAACGGGCCGACGCGCTGCAGCGACTGGCGGAAGGGTTCGACGGACTGCTGGTGACGAGCGTAGAGGCGGCCGGGGAGCTCGTCCCTCCGCCGGAGGCCGTGAAACGCGAAACCCTCACCGTGAAGAAGGGCGAAGAAATCTCCCTGGAGGCGCTGGCCGACCGGCTGGTGGAGCAGGACTTTTCCCCCGTCGAATTCGTGGAGGAGCCCGGCGAGTTTGCGCGTCGCGGCGGCATCCTCGACGTCTTCCCCTACGCCGGCAGCTACCCGGTGCGCATCGACTTCTTCGGCGACGAGATCGATGGCCTTCGGGAATTCGACCCGCAGACCCAGCGCTCCGTCAGCCGCCTCACCACCGCCCGCCTCGTGCCCAACCTGGAGCGCGAGGCAGCGGCCCAGGGGTCCATTCCCCTGTTCGAGTACCTGCCCGACGACGTCGTTCTCGCGACGGTCGACGAGTCTCAGATCCGGGAGGGCGTGCAGGCGCAGTACGACGAGGCCGTCGAGGCCTACGAGGACAGACGAGCGGAGCTCGAAGGCGACGAGGACGCCGATCCGTCGCCCGACGACCTCCCGTCCCCGGACCGGCGCTTCCTCGACCGGCCGGCCCTGGAGACCTTGCTGGGGCAGCACCCGCGCATGCTCTTCGGCACCTTCGCCGACAGCACCCGCACCAACGGCACCCCCAAGGAGACGCTGGCGATCGGCACCGACCCGCAGCCGTCCTTCAACAGCGACATGGACCTGGTGCGGAAGCGGCTGAAGGAGAACGGCGGACGGGACCTGGACACCTTTCTCCTGTGTGACAGCCACGGCCAGAGCTCCCGCCTCCGCGACCTGCTGGAGTCGGAGATCGACCACGGCTGGGCGCGCCTCGTCGTCGAGTCGCTGCACGAGGGCTTCGAGTGGCCCGAGGCCCGGCTCGCCGTCTACACCGACCACCAGATCTTTAACCGGTACCACCGCCCGTCCACCAAGCAGCGGGAGAAGAAAAGCGGGGGCATGAGCATCCGCGACATCAAAAACCTGACGCCGGGCGACTTCGTCGTGCACGTCGACCACGGCATCGGCACGTTCGACGGTCTCAAGAAAATCACCGTCCGCGACAAACAGCAGGAGGCCGTCCGCCTCAACTTTGCGGACGACGACATCCTCTACGTCAACGTCAACGCCCTCTACAAGCTCAACAAGTACACGGGCAAGGAGGGCCACCAGCCCACCCTTACCAAGCTCGGCTCCGGACAGTGGGAAAAGACCAAGGAGCGAACGAAGAGCAAGGTCAAGGACATCGCACGGGACCTCATCAAGCTGTACGCCAAGCGGAAGGCGTCGGACGGCTACGCCTTCTCCAGCGACACCACGTGGCAGCGGGAGATGGAGGCGAGCTTTGAGTTTGAGGACACGCCCGACCAGGCGAAGGCCGCCGAGGCCGTGAAACAGGACATGGAGGAACCGGTGCCGATGGATCGGCTCGTCTGCGGAGACGTGGGCTTCGGCAAGACGGAGGTCGCCATCCGTGCCGCGTTCAAGGCCGTGCAGGACGGCAAGCAGGTGGCCATGCTCGTGCCCACCACCATCTTGGCGCAGCAGCACCACGAGACCTTCAGCAGGCGCCTGGAGCGCTTCCCCGTGAACGTGGAGGTACTGTCCCGCTTCCGCACGAAGGCCGAAGAGAAGGAGGTACTGGAGAAGCTCAAGACGGGCCGGGTCGACATCCTGATCGGGACGCACCGCATCACGAGCGACGACGTGGACTTCGACGACCTCGGCCTCCTCATTATCGATGAGGAGCAGCGCTTTGGCGTAAAGACGAAGGAGACCCTTCGGAAGATGCGGGAGGACATCGACACCCTCACGCTCACCGCCACCCCCATTCCACGGACGCTCCAGTTCTCCCTCCTGGGGGCGCGGGACCTCTCCCTCATCGAGACGCCGCCGCCCAACCGGCAGGCCATCAACACCGAGATCCACACCTTCGACGAGGACGTCATCCGGGATGCCATCCGGTACGAGACGAGCCGGGGCGGGCAGGTCTTCTTCATCCACAACCGCGTGAAGACGATCAACGAGATTGCGGAGATGGTGCGCGCCATGGTGCCGGACGTGCGGGTGGGCGTGGGCCACGGCCAGATGAGCACCGGCGAGCTGGAGGACGTGATGGTCAGCTTTCTCGACGGCAAGCTCGACGTGCTCGTCTCCACCTCAATCATCGAGAACGGGCTCGACATCTCGAACGCCAATACGATGATCATCAACCACGCGGGCGATCACTTCGGCCTCTCGGAGCTGCACCAGCTCCGGGGCCGCGTGGGCCGCTCGCAGCGGAAGGCGTTCTGCTACCTGCTGGTGCCGTCGGTCCACAGCCTCACGGATGACGCCCGCGAGCGCCTGAAGGCCGTGGAGCAGTTCTCGGACCTCGGCAGCGGCTTCGACATTGCGATGCGCGACCTCGACATCCGCGGCGCCGGGGCGCTGCTGGGCGCCGAGCAGAGTGGCTTCATCGAGGACGTGGGCTACGAAACGTACCACAAGATTCTCGACCAAGCGATCAAGGAACTGCGGGAGGAAGAGTTCGACGACGTGTTCGACGGCGAGGCCGTGCCTCCGGGCCCCGAAACCTCGGTGGACGTGGAGGTGGACGCCTACATCCCGGAGGACTACGTGCGCGACAACACCGAGCGCCTCAATCTCTACCGCCGCATCAGCGACGCGCCGGACGAGACGACGCTGGTAGACCTGCTCGACGAGATGGAAGACCGCTTCGGCGACGCGCCGGAGCCGGTGCAG
PROTEIN sequence
Length: 1070
MPPRSLSPEASGRIGTRARTDLTHQTENPPVSLSSIAQRIETTAAVSRLRSWVDDAQAVTEAPALHVTGAAGSVPAFLLYHVHTSPGAPLCILVPDEDAAAYLQSDLEQLVDDPEEQVLRVPATQRPPYDRDQITDSTPLIERADALQRLAEGFDGLLVTSVEAAGELVPPPEAVKRETLTVKKGEEISLEALADRLVEQDFSPVEFVEEPGEFARRGGILDVFPYAGSYPVRIDFFGDEIDGLREFDPQTQRSVSRLTTARLVPNLEREAAAQGSIPLFEYLPDDVVLATVDESQIREGVQAQYDEAVEAYEDRRAELEGDEDADPSPDDLPSPDRRFLDRPALETLLGQHPRMLFGTFADSTRTNGTPKETLAIGTDPQPSFNSDMDLVRKRLKENGGRDLDTFLLCDSHGQSSRLRDLLESEIDHGWARLVVESLHEGFEWPEARLAVYTDHQIFNRYHRPSTKQREKKSGGMSIRDIKNLTPGDFVVHVDHGIGTFDGLKKITVRDKQQEAVRLNFADDDILYVNVNALYKLNKYTGKEGHQPTLTKLGSGQWEKTKERTKSKVKDIARDLIKLYAKRKASDGYAFSSDTTWQREMEASFEFEDTPDQAKAAEAVKQDMEEPVPMDRLVCGDVGFGKTEVAIRAAFKAVQDGKQVAMLVPTTILAQQHHETFSRRLERFPVNVEVLSRFRTKAEEKEVLEKLKTGRVDILIGTHRITSDDVDFDDLGLLIIDEEQRFGVKTKETLRKMREDIDTLTLTATPIPRTLQFSLLGARDLSLIETPPPNRQAINTEIHTFDEDVIRDAIRYETSRGGQVFFIHNRVKTINEIAEMVRAMVPDVRVGVGHGQMSTGELEDVMVSFLDGKLDVLVSTSIIENGLDISNANTMIINHAGDHFGLSELHQLRGRVGRSQRKAFCYLLVPSVHSLTDDARERLKAVEQFSDLGSGFDIAMRDLDIRGAGALLGAEQSGFIEDVGYETYHKILDQAIKELREEEFDDVFDGEAVPPGPETSVDVEVDAYIPEDYVRDNTERLNLYRRISDAPDETTLVDLLDEMEDRFGDAPEPVQ