ggKbase home page

qh_2_scaffold_11746_2

Organism: QH_2_Parcubacteria_50_6

partial RP 29 / 55 MC: 6 BSCG 30 / 51 MC: 8 ASCG 7 / 38 MC: 3
Location: comp(1098..1673)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 {ECO:0000313|EMBL:KKR40025.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 195.0
  • Bit_score: 173
  • Evalue 2.30e-40
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5803407 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 195.0
  • Bit_score: 163
  • Evalue 2.20e-37
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 190.0
  • Bit_score: 153
  • Evalue 6.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWC1_40_11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 576
GGATCCGGGGTATTCGAGAAATGCCAAACCCAGAAGTTCGAAACCTCCAAAAACCGCGGAGACAGCGGTGGGCGCGGCCGGCGGCAGTCAAACTACGGACAGCAGCTGGAAGAAAAGCAGCGCGTGCGCTTTAGTTACGGAGTTCGTGAAGAGCAGTTTAAAAACTATATTACTGCTGCAACCAGCCAAAACAAAATGCGGCCGGCAGACGCTTTATATGCCGGGCTCGAGAAGCGTCTTGATAATGTTGTCTACCGACTGGGGTTTGGAAAAACCCGGCAGATGTCCCGTCAGCTGGTAAACCACGGCCATATGTGCGTTAACGGCAAGCGGGTTGATATTCCGTCCTACACAGTGGAAACCGGCGATACGGTTCACGTTCGGGAAGAAAGTAAAGACAAAGAACCGTTCCGCATTGCTCAGGAAGGAAAGCAGGGGTATGAGGCGTATACACCACCGGCCTGGTTATCTGTTGACCGTGAAGAGTTGTCCGGCACAATCCAGGCCAAGCCAAATTATGATCCGACAACAGAAGTCTTTGATCTGACAACCGTCATTGAGTTTTACGGCCGCTAA
PROTEIN sequence
Length: 192
GSGVFEKCQTQKFETSKNRGDSGGRGRRQSNYGQQLEEKQRVRFSYGVREEQFKNYITAATSQNKMRPADALYAGLEKRLDNVVYRLGFGKTRQMSRQLVNHGHMCVNGKRVDIPSYTVETGDTVHVREESKDKEPFRIAQEGKQGYEAYTPPAWLSVDREELSGTIQAKPNYDPTTEVFDLTTVIEFYGR*