ggKbase home page

qh_3_scaffold_1232_2

Organism: QH_3_Salinibacter_ruber_64_59

near complete RP 49 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(1173..2609)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=309807 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 481.0
  • Bit_score: 782
  • Evalue 3.50e-223
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 481.0
  • Bit_score: 782
  • Evalue 7.00e-224
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=24658178 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 482.0
  • Bit_score: 782
  • Evalue 2.50e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1437
ATGAAGATTTCGACATTGCAAGAGAAGAAGCTCGATGAACTTCGGGAAATTGCCCGAGAGCTCGACCTCTCCGGCTACTCCGACCTTCGGAAGCAGGACCTCATCTACCGCATCCTGGAGGCGCAGGCCGAAGGTGCGGCCTCGGACGAGGGGCCCCAGGAGCCGTCGGGCGACGCCGATGCCCTATCGACCGCTCCCCCTGGCGACGGGGCCGAGCCGGAGCCTGAGGAGTCGAGGGAGACCGCGTCCGAGCGCTCCCGCGAATCGGACCGGGACACCGGCAAGCCGACGTACATGCGGCGCTACGACCCCGACGAGACGGAACTCCGGGGCATGATCAAGAAGGTCGGCGTGCTCGAAATCCTGCCGGATGGGTACGGATTCCTTCGGTCCGATGAGTACAGCTATCAGTCGAGTCCGGATGACATCTACGTCTCCCCGTCCCAGATCAAGCGCTTCGGCCTGCAGGAAGGCGACACGGTAAAGGGCAGTGTGCGTCCGCCCAAGGAAGGCGAAAAGTTCTTCGCCCTCATCCAGGTCGATGCGATCAATGGGTGCGATCCGAGTGAGCTTGACGAACGGCCCGACTTTGAGTACCTGACGCCGATTTTTCCGCAGGAGCGGCTCACGCTCGAAACCGACCCGGAGGACCACGGCCCGCGCATTCTCGACCTGTTTGCGCCCATTGGCAAAGGGCAGCGCGGCCTCATCGTCTCGCCGCCGAAGGCCGGGAAGACGGTCCTGCTTCAGAAGATCGCGAAAGGCATCAAGGCCAACCATCCGAACGTGCACCTCCTCGTCCTACTCATCGACGAGCGCCCGGAGGAGGTGACCGACATGGACCGCACGGTGGATGGAGAGGTCGTCGCCTCCACGTTCGACAAAGACCCGGAGCGGCACGTCGATGTGGCCGACACGGTGCTCCTGAAGGTGCGGCGCCTCGTGGAGTCCGGACAGGACGTGTGCGTGCTGCTCGACTCGATTACGCGCCTGGCCCGGGCCCACAACGCCGTGACGCCCGAAAAGGGGCGCACGCTGTCCGGCGGCATCGAGGCGGGCGCCCTGCGGGGCCCGAAGCGGTTCTTCGGCGCGGCTCGCAACGTCGAGGAGGGCGGGTCCCTCACCATCGTCGGCACCGCCCTCGTCGACACGGGCAGCCGCATGGATCAGGTCATCTTCGAAGAGTTCAAGGGCACCGGCAACATGGAGCTCGTCCTGGACCGTGAGATGGCCGACCGGCGCCTCTTCCCTGCCATCGACCTCATCCTCTCCGGCACGCGCCGGGAGGAGCTTCTCCTGCCGAAGCCGCAACTGAAGCGCGTGTGGGTGATGCGCAAGATCCTGGCCGACATGGAGCCGATTGAGGCCATGGAGTTCCTCCTCGACAAGATGAGGGGCACGGACGACAACGAGGAGTTCCTGGAAACGATGAACTGA
PROTEIN sequence
Length: 479
MKISTLQEKKLDELREIARELDLSGYSDLRKQDLIYRILEAQAEGAASDEGPQEPSGDADALSTAPPGDGAEPEPEESRETASERSRESDRDTGKPTYMRRYDPDETELRGMIKKVGVLEILPDGYGFLRSDEYSYQSSPDDIYVSPSQIKRFGLQEGDTVKGSVRPPKEGEKFFALIQVDAINGCDPSELDERPDFEYLTPIFPQERLTLETDPEDHGPRILDLFAPIGKGQRGLIVSPPKAGKTVLLQKIAKGIKANHPNVHLLVLLIDERPEEVTDMDRTVDGEVVASTFDKDPERHVDVADTVLLKVRRLVESGQDVCVLLDSITRLARAHNAVTPEKGRTLSGGIEAGALRGPKRFFGAARNVEEGGSLTIVGTALVDTGSRMDQVIFEEFKGTGNMELVLDREMADRRLFPAIDLILSGTRREELLLPKPQLKRVWVMRKILADMEPIEAMEFLLDKMRGTDDNEEFLETMN*