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qh_6_scaffold_1180_2

Organism: QH_6_Salinibacter_ruber_63_17

near complete RP 44 / 55 MC: 3 BSCG 41 / 51 MC: 3 ASCG 7 / 38
Location: 1185..2024

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 279.0
  • Bit_score: 538
  • Evalue 1.30e-150
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor id=24657877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 280.0
  • Bit_score: 538
  • Evalue 4.70e-150
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CBH25085.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 279.0
  • Bit_score: 538
  • Evalue 6.60e-150

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 840
ATGCAAGTTTCACGCGAACAACGGATGCTGGACCAGTACCTCCAGGAGATCGGGAAAATTGACCTTCTCGAGCCGGAGGAGGAAGTCGAACTGGCACGACGCATCGAAGACGGCGACGAGGAGGCCCTTCACCAACTCTGCCGTGCCAACCTGCGATTCGTCGTCTCGGTCGCGAAGAAGTACCAAGGACAGGGCCTGTCGCTTGCCGACCTGATCAACGAAGGCAACTACGGCCTCATCAAGGCGGCCAAGCGGTTCGACGAGACGCGCGGATTCAAGTTCATCTCCTACGCGGTCTGGTGGATCCGGCAGGCCATCCTGCAGGCCCTCGCCGAGCAGAGCCGCGTGGTGCGTCTTCCCCTCAACCGCATCGGCACGATCTCGAAGATCCGCAAGGCCAGTGCCCGGCTCCAGCAGGATCTCGACCGGAAGCCCAACATCGAAGAGCTGGCCGAGGAGCTTGAGATCGACGTCCAGAAGGTGCGCGAGGCGATGAAGCACACCAGCCGCCACCTTTCCATGGATGCGCCCTTCAACGAGGAGGATGACAACAGCCTCCTCGACGTGCTGCCCGATGAGGAGAGCGATTCGCCCGACGAGGAGATGCTTTCCGAGTCGGTCAAGATCGACATCGAGCACGCCCTCAGCGCGCTGCACGACCGCGAGGCGGAAATCACGCGCCTCTACTTCGGCATTGGGCGTGAGCACCCGCTGACGCTTGAGGAGATCGGCAAGCGCTTCGACCTCACGCGAGAGCGCGTCCGCCAGATCAAGGAGAAGGCCCTCCGGAAGCTTCGCCAGCGACACAGTCGACAAGACCTCCAGCCGCACACCGACTAG
PROTEIN sequence
Length: 280
MQVSREQRMLDQYLQEIGKIDLLEPEEEVELARRIEDGDEEALHQLCRANLRFVVSVAKKYQGQGLSLADLINEGNYGLIKAAKRFDETRGFKFISYAVWWIRQAILQALAEQSRVVRLPLNRIGTISKIRKASARLQQDLDRKPNIEELAEELEIDVQKVREAMKHTSRHLSMDAPFNEEDDNSLLDVLPDEESDSPDEEMLSESVKIDIEHALSALHDREAEITRLYFGIGREHPLTLEEIGKRFDLTRERVRQIKEKALRKLRQRHSRQDLQPHTD*