ggKbase home page

qh_8_scaffold_20419_4

Organism: QH_8_Salinibacter_ruber_64_112

partial RP 42 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 1938..2579

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659133 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 208.0
  • Bit_score: 365
  • Evalue 3.20e-98
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 208.0
  • Bit_score: 365
  • Evalue 4.50e-98
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 208.0
  • Bit_score: 365
  • Evalue 9.10e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 642
ATGGTCAATGCACTGCCCGAGGACCCGGACCATCCGGTCGTGCGGCCCGGCATTGTGCACCGGCTGGACAAGGGCACGTCTGGCCTCTTGGTAGTGGCGAAACGCGACCGGGCGCACCAGCCGCTGGCGGAGCAGTTCAAGGAGCACACCGTGGAGCGCCGGTACCGAGCCCTCGTGTGGGGCCGCTTCGAATCGCCGAGGGGCACCATCGAGGGGGCGATTGGCCGCGACCCGAACCACCGGCAGCGCATGGCCGTGGTGCCGGAGGAGAACGGGAAGTGGGCCGTCACGCACTACGAAACCGTCGAGACCCACGCCCACACCTCCGTCGTCGACTTCCGGCTAGAAACTGGGCGTACCCACCAGATTCGCGTCCACGCTCGAGCGCAGGGCCATCCACTTCTCGGGGATCCGAAGTACGGGGGACAGCGGGTTCGCTACGGGACCCAGAGCCAGGACCGACGGGCCTTCTTCGAGCACCTGTTCGAGGTCCTCCCGCACCCGGCGCTGCACGCATACCGCCTCGGATTTGCCCATCCCACCACGGACGAGGGCCTGCATTTTGAGGCCGACCCGCCGACCGAGTGGCAGCGTGTGCTCGACCGGTTGCGGGCCAACGACGGGCAAACCGGCCGTCGCTGA
PROTEIN sequence
Length: 214
MVNALPEDPDHPVVRPGIVHRLDKGTSGLLVVAKRDRAHQPLAEQFKEHTVERRYRALVWGRFESPRGTIEGAIGRDPNHRQRMAVVPEENGKWAVTHYETVETHAHTSVVDFRLETGRTHQIRVHARAQGHPLLGDPKYGGQRVRYGTQSQDRRAFFEHLFEVLPHPALHAYRLGFAHPTTDEGLHFEADPPTEWQRVLDRLRANDGQTGRR*